Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0332
(552 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-2559|AAF57791.1| 649|Drosophila melanogaster CG18635-P... 29 3.2
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 7.3
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 7.3
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 7.3
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 7.3
DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 7.3
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 7.3
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 7.3
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 28 7.3
DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1 prot... 28 9.7
>AE013599-2559|AAF57791.1| 649|Drosophila melanogaster CG18635-PA
protein.
Length = 649
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 305 IEPHIHWKPQLIDGILKYGD-RVHTMSLPRASAPPGLRPNEIID 433
I+ ++ P+L+ G LK D HT+ +P++ P L P +++D
Sbjct: 418 IKENVPHPPKLLIGRLKDEDPEEHTVLIPQSPKPSPLTPKDVVD 461
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 459 KPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 500
>DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 185 QPRPSFGQR--KTGTRRGILFRASERDHQDAANSIMGIVVEN 304
+P+PS G + TRR + R RDH D ++++ ++ N
Sbjct: 402 KPKPSSGASTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCN 443
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,946,405
Number of Sequences: 53049
Number of extensions: 358003
Number of successful extensions: 1121
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -