Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0331
(557 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 122 6e-27
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 99 8e-20
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 95 1e-18
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 90 3e-17
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 86 5e-16
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 85 1e-15
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 83 4e-15
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 81 2e-14
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 75 1e-12
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 75 1e-12
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 70 4e-11
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 69 6e-11
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 69 7e-11
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 65 9e-10
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 64 3e-09
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 64 3e-09
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 62 9e-09
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 62 1e-08
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 55 1e-06
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 54 2e-06
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 53 4e-06
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 53 5e-06
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 51 2e-05
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 49 6e-05
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 47 3e-04
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 46 6e-04
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 46 6e-04
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 46 6e-04
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 46 6e-04
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 45 0.001
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 44 0.002
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 44 0.002
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 44 0.002
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 44 0.002
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 44 0.003
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 43 0.006
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 38 0.21
UniRef50_UPI00015B4F87 Cluster: PREDICTED: similar to prophenolo... 37 0.28
UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2; Clos... 34 2.0
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 34 2.6
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 33 3.4
UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p... 33 4.5
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia fuck... 32 7.9
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 32 7.9
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 32 7.9
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 122 bits (294), Expect = 6e-27
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQK 434
KGVT GFQYKMRAVYAHFPINCVT+E N++I IRNFLGEKYI RV+MAPGVTVVNS QK
Sbjct: 80 KGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQK 139
Query: 435 DELIIEG 455
DELI+EG
Sbjct: 140 DELIVEG 146
Score = 109 bits (261), Expect = 6e-23
Identities = 51/80 (63%), Positives = 62/80 (77%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFG 198
M+ I +NQ IP + VK+R+VT+ G RG LKR+FKHLA D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 199 SKKELAAVRTVCSHVENMIK 258
+KKELAAVRTVCSH+ENMIK
Sbjct: 61 TKKELAAVRTVCSHIENMIK 80
Score = 56.0 bits (129), Expect = 6e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+ +E VS SAALIQ+STTVKNKDIRKF DGLYV
Sbjct: 147 NDIESVSGSAALIQQSTTVKNKDIRKFLDGLYV 179
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 98.7 bits (235), Expect = 8e-20
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQK 434
KGVT GF+YKMR+VYAHFPIN V E S++ IRNFLGEKYI RV+M PGV S QK
Sbjct: 82 KGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQK 141
Query: 435 DELIIEG 455
DELI+EG
Sbjct: 142 DELILEG 148
Score = 92.7 bits (220), Expect = 5e-18
Identities = 41/82 (50%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRL--LKVEKW 192
MK I++NQ IP V + +K R V VKGPRG L+R+F H+ ++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 193 FGSKKELAAVRTVCSHVENMIK 258
+G++KELA VRT+CSHV+NMIK
Sbjct: 61 WGNRKELATVRTICSHVQNMIK 82
Score = 52.8 bits (121), Expect = 5e-06
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+ +E VS+SAALIQ++TTVKNKDIRKF DG+YV
Sbjct: 149 NDIELVSNSAALIQQATTVKNKDIRKFLDGIYV 181
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFG 198
MK + +N P VT VK+R+V V GPRG LKR+F+HL ++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 199 SKKELAAVRTVCSHVENMIK 258
+KE+AA+RTVCSH++NMIK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIK 80
Score = 67.3 bits (157), Expect = 2e-10
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKM 395
KGVTKGF+YKMR+VYAHFPIN +G + IRNFLGEK + V +
Sbjct: 80 KGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 90.2 bits (214), Expect = 3e-17
Identities = 40/66 (60%), Positives = 50/66 (75%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
GVTKG++YKMR VYAHFPIN T N+ I IRNFLGEK + +V M GVT++ S K KD
Sbjct: 82 GVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKD 141
Query: 438 ELIIEG 455
EL+++G
Sbjct: 142 ELVLDG 147
Score = 86.6 bits (205), Expect = 3e-16
Identities = 40/80 (50%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMV-NPRLLKVEKWF 195
MK I+A++ IP VTV V +++VTV+GPRG L RNFKHL D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 196 GSKKELAAVRTVCSHVENMI 255
G+++ +AA+RT SHV+N+I
Sbjct: 61 GTRRTMAAIRTAISHVQNLI 80
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+ +E VS SAALI + VKNKDIRKF DG+YV
Sbjct: 148 NDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 180
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 86.2 bits (204), Expect = 5e-16
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
GVTKG++YKMR VYAHFPIN T+G ++ IRNF GEK + R+++ G+T + K KD
Sbjct: 99 GVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKD 158
Query: 438 ELIIEG 455
E+++ G
Sbjct: 159 EIVLTG 164
Score = 72.1 bits (169), Expect = 8e-12
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +1
Query: 64 VTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 243
VTV VK R V V GPRG L ++F H + DI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 244 ENMI 255
ENMI
Sbjct: 94 ENMI 97
Score = 39.5 bits (88), Expect = 0.052
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+SLE +S S A IQ + +K KD+RKF DG+YV
Sbjct: 165 NSLELLSQSCATIQLRSAIKYKDVRKFLDGIYV 197
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/66 (59%), Positives = 48/66 (72%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
GVT+GF+YKMR VYAHFPIN TE +++ IRNFLGE+ +K PGVTV S KD
Sbjct: 81 GVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKD 140
Query: 438 ELIIEG 455
E+I+EG
Sbjct: 141 EIILEG 146
Score = 62.5 bits (145), Expect = 6e-09
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +1
Query: 22 KQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFGS 201
+ I ++ IP VTV +K+R VTV GPRG LK+N +H+ +++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 202 KKELAAVRTVCSHVENMI 255
+K A +R+V S + NMI
Sbjct: 62 RKHNACIRSVYSIINNMI 79
Score = 45.6 bits (103), Expect = 8e-04
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+SLE+VS SAA I++ V+NKDIRKF DG+YV
Sbjct: 147 NSLENVSQSAANIKQICNVRNKDIRKFLDGIYV 179
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 83.0 bits (196), Expect = 4e-15
Identities = 37/67 (55%), Positives = 45/67 (67%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQK 434
KGVT GFQYKMRAVYAHFPIN + IRNFLGEK + + M GVT+ QK
Sbjct: 142 KGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQK 201
Query: 435 DELIIEG 455
D++++EG
Sbjct: 202 DQVLVEG 208
Score = 41.5 bits (93), Expect = 0.013
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLY 550
+ ++ VS SAAL+ +T V+NKDIRKF DG+Y
Sbjct: 209 NDIDLVSQSAALLHGATLVRNKDIRKFLDGIY 240
Score = 34.7 bits (76), Expect = 1.5
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRN 129
M QI +P V+V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 81.0 bits (191), Expect = 2e-14
Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLK--VEKW 192
MK I++NQ IP + + +K R V VKGP+G L R+F H+ ++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 193 FGSKKELAAVRTVCSHVENMIK 258
+G++KELA V T+CS V+N IK
Sbjct: 61 WGNRKELATVHTICSPVQNTIK 82
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 74.9 bits (176), Expect = 1e-12
Identities = 34/67 (50%), Positives = 42/67 (62%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQK 434
KGVT GF+YKMR YAHFPI + N I IRNF+ + R++ PGVT+ S K
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVK 137
Query: 435 DELIIEG 455
DELI+ G
Sbjct: 138 DELILRG 144
Score = 62.1 bits (144), Expect = 9e-09
Identities = 30/69 (43%), Positives = 38/69 (55%)
Frame = +1
Query: 52 IPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFGSKKELAAVRTV 231
+P V + R+VTVKG +G L R+F H DI N + V WF K A RT+
Sbjct: 11 VPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGKRNALPRTI 69
Query: 232 CSHVENMIK 258
CSH+ENM K
Sbjct: 70 CSHIENMFK 78
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +2
Query: 458 SLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
S+EDVS +AA I ES V NKD+RKF DG YV
Sbjct: 146 SIEDVSHTAARIHESLKVPNKDLRKFLDGCYV 177
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINC--VTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQ 431
GVTKG++YKMR VYAHFPIN V +G I +RNFLG+K I V + GVT+ S
Sbjct: 81 GVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNV 140
Query: 432 KDELIIEG 455
KDE+++ G
Sbjct: 141 KDEIVLSG 148
Score = 74.5 bits (175), Expect = 1e-12
Identities = 38/79 (48%), Positives = 50/79 (63%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFG 198
MK I Q+ +P VTV +KSR+V V GPRG L +N KH+ VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 199 SKKELAAVRTVCSHVENMI 255
+K +AA+RTV S V+NMI
Sbjct: 61 GRKHVAALRTVKSLVDNMI 79
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+S+EDVS +AA +Q+ V+NKDIRKF DG+YV
Sbjct: 149 NSVEDVSQNAADLQQICRVRNKDIRKFLDGIYV 181
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 69.7 bits (163), Expect = 4e-11
Identities = 33/66 (50%), Positives = 42/66 (63%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
GVTKG+QYKMR VYAHFP+ V + I ++NFLGEK ++M GV V KD
Sbjct: 91 GVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVV--KKLGKD 148
Query: 438 ELIIEG 455
E+ +EG
Sbjct: 149 EICLEG 154
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Frame = +1
Query: 52 IPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDI-------RMVNPR--LLKVEKWFGSK 204
IP V + + + + V GPRG L R F+H DI + P+ ++ ++ W+G++
Sbjct: 13 IPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMWYGNR 72
Query: 205 KELAAVRTVCSHVENMI 255
++ A VRT+ SH++NMI
Sbjct: 73 RDSAVVRTIASHIKNMI 89
Score = 39.5 bits (88), Expect = 0.052
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+ +E VS SAA I + V+NKDIR+F DG+YV
Sbjct: 155 NDVEKVSQSAANIHAANLVRNKDIRQFLDGVYV 187
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 69.3 bits (162), Expect = 6e-11
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
GV+ GF+Y ++ +YAHFPIN T+ S + IRNFLGEK I ++ M GV + + +KD
Sbjct: 82 GVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKD 141
Query: 438 ELIIEGT 458
E+ + G+
Sbjct: 142 EISVFGS 148
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRL-LKVEKWF 195
M I +K IP V + K+R ++ G G + R+F+ IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 196 GSKKELAAVRTVCSHVENMI 255
KK+LA + T+ SH+ NMI
Sbjct: 61 AGKKQLAKLNTIASHITNMI 80
Score = 39.9 bits (89), Expect = 0.039
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 470 VSSSAALIQESTTVKNKDIRKFXDGLYV 553
VS +AA IQ+S KNKD+RKF DG+Y+
Sbjct: 153 VSLNAASIQQSCQAKNKDLRKFLDGIYI 180
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 68.9 bits (161), Expect = 7e-11
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +1
Query: 64 VTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNP-RLLKVEKWFGSKKELAAVRTVCSH 240
V V +KSR + V G G L+R F+H+ D+++V R + VE WFG K A +RTVCSH
Sbjct: 78 VKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNKACIRTVCSH 137
Query: 241 VENMI 255
+ENMI
Sbjct: 138 IENMI 142
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFL 365
GV + +QYK+R VYAHFPIN T S I IRNFL
Sbjct: 144 GVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 65.3 bits (152), Expect = 9e-10
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQK 434
KGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK + K+ PGVTV +
Sbjct: 80 KGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVRG 134
Query: 435 DELIIEG 455
E+I+EG
Sbjct: 135 QEIIVEG 141
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 40 QKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFGSKKELAA 219
++ IP V V V+ V VKGP+G L+R F I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 220 VRTVCSHVENMIK 258
RT +H+ NMIK
Sbjct: 68 ARTFAAHIRNMIK 80
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 63.7 bits (148), Expect = 3e-09
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +3
Query: 231 LFTCREHDKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVT 410
L +C EHD+G GF Y+MR+VYA FP N + E S+I + +G+KYI RV++ V
Sbjct: 23 LQSCSEHDQG---GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVA 79
Query: 411 VVNSPKQKDELI 446
S QK+EL+
Sbjct: 80 FYASQAQKNELM 91
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 63.7 bits (148), Expect = 3e-09
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQK 434
K VT GF Y M+AVY HF IN E I+ ++NFLGEK + R +M G V ++K
Sbjct: 99 KAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRLDERK 157
Query: 435 DELIIEG 455
D ++IEG
Sbjct: 158 DTIVIEG 164
Score = 34.7 bits (76), Expect = 1.5
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 458 SLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
SL DVS SA I KN+D R F DG++V
Sbjct: 166 SLSDVSQSAGTITNECKAKNRDSRVFLDGIFV 197
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 62.1 bits (144), Expect = 9e-09
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +3
Query: 201 QKGACRRXDSLFTCREHDKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYI 380
+K C+ R +GVT G+++KM YAHFPI + I+NFLGEK I
Sbjct: 71 RKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKII 130
Query: 381 XRVKMAPGVTVV-NSPKQKDELIIEG 455
+K PGVT+ N ++K+ L ++G
Sbjct: 131 RTIKCLPGVTITRNEAEEKNVLTLQG 156
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRM---VNPR------ 171
MK I+ + IP + + KS++V VKGPRG L +NF+H A DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 172 LLKVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVS 324
+ V W +K+ V +V S + NMI+ + VL P+ ++
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIIN 111
Score = 41.5 bits (93), Expect = 0.013
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+ L +VS + ALI ++ VKNKDIR+F DG+YV
Sbjct: 157 NDLNNVSLTCALIHQACAVKNKDIRQFLDGIYV 189
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTV 413
KGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK R K+ PGVTV
Sbjct: 80 KGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV 130
Score = 52.8 bits (121), Expect = 5e-06
Identities = 32/94 (34%), Positives = 50/94 (53%)
Frame = +1
Query: 40 QKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFGSKKELAA 219
++ IP V V V+ V VKGP+G L+R K+ I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 220 VRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 321
VRT +H+ NMIK + R + P+TV
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV 101
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K+
Sbjct: 85 GVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKE 140
Query: 438 ELIIEG 455
+++IEG
Sbjct: 141 DIVIEG 146
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ + PG V +KD
Sbjct: 81 GVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKD 135
Query: 438 ELIIEG 455
++I+EG
Sbjct: 136 DVIVEG 141
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFG 198
M+ + + IP V V V + V V+GP G ++++F H V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIRVEGNSVVVETFHA 60
Query: 199 SKKELAAVRTVCSHVENMI 255
+KK+ A V T+ S + NMI
Sbjct: 61 TKKDYALVGTIASIINNMI 79
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKM 395
GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ R K+
Sbjct: 99 GVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKI 142
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 52.8 bits (121), Expect = 5e-06
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +1
Query: 64 VTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRL--LKVEKWFGSKKELAAVRTVCS 237
V + + +V VK RG L+R+F H+ ++R++ R L+V+KW + K LA T+ S
Sbjct: 10 VKIPENAHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK-LATAHTIYS 68
Query: 238 HVENMIK 258
HV+NMIK
Sbjct: 69 HVQNMIK 75
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTV 413
+GV G++Y+M+ VY+HFPI + +GN + I NFLGEK K+ GVTV
Sbjct: 76 RGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTV 126
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 49.2 bits (112), Expect = 6e-05
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTV-VNSPKQK 434
GVT G++YKM VY+HFPI +E F+G K V GV + N K
Sbjct: 89 GVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAK 148
Query: 435 DELIIEG 455
DE+ IEG
Sbjct: 149 DEINIEG 155
Score = 39.5 bits (88), Expect = 0.052
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 458 SLEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+LEDVS I + T +K+KD+RKF DG+YV
Sbjct: 157 NLEDVSLVCGQIHQLTKIKDKDLRKFLDGIYV 188
Score = 34.7 bits (76), Expect = 1.5
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Frame = +1
Query: 22 KQIVANQKXXIPXXVTVXVKSRLVTVK--GPR----GVLKRNFKHLAXDIRM-VNPRLLK 180
+ ++ + IP + VKS +VT++ P+ L ++ HL D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 181 VEKWFGSKKELAAVRTVCSHVENMI 255
WFG++K LA + T+ V+NMI
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMI 87
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTV 413
+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK K+ G V
Sbjct: 79 EGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV 129
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 46.0 bits (104), Expect = 6e-04
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 464 EDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
E VS+SAALIQ++T V+N+DIRKF DG+YV
Sbjct: 95 ELVSNSAALIQKATAVENQDIRKFVDGIYV 124
Score = 41.5 bits (93), Expect = 0.013
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCV 323
KGV+ GF+YK+R+VYAHFP+N V
Sbjct: 47 KGVSLGFRYKVRSVYAHFPLNVV 69
Score = 37.1 bits (82), Expect = 0.28
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 205 KELAAVRTVCSHVENMIK 258
KELA VRT+CSHV+NMIK
Sbjct: 30 KELATVRTICSHVQNMIK 47
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 46.0 bits (104), Expect = 6e-04
Identities = 22/67 (32%), Positives = 40/67 (59%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
G G++Y ++ + HFPI+ V G+ + + N +GEK I R K+ PGV V + +
Sbjct: 84 GTINGYRYYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIRRAKILPGVKVT---VKGE 138
Query: 438 ELIIEGT 458
++++EG+
Sbjct: 139 DIVVEGS 145
Score = 42.7 bits (96), Expect = 0.006
Identities = 22/80 (27%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRM-VNPRLLKVEKWF 195
+K ++ IP V V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 196 GSKKELAAVRTVCSHVENMI 255
+++ A + ++ +H++NMI
Sbjct: 63 ADRRKKALLYSIIAHIKNMI 82
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 46.0 bits (104), Expect = 6e-04
Identities = 26/101 (25%), Positives = 50/101 (49%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFG 198
M+ + + IP V V ++ ++ V GP+G ++R F H + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFA 59
Query: 199 SKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 321
+++E + T SH++NM++ R +C P+ V
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRV 100
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 46.0 bits (104), Expect = 6e-04
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R+ G T V +
Sbjct: 79 GVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKK-PRIAKILGETKVK--VSGN 133
Query: 438 ELIIEG 455
E+++ G
Sbjct: 134 EIVVSG 139
Score = 38.3 bits (85), Expect = 0.12
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +1
Query: 52 IPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFGSKKELAAVRTV 231
IP V+V + + T KGP+G ++R F + I + ++ V+ K++ A V T
Sbjct: 11 IPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVGTF 69
Query: 232 CSHVENMI 255
SH++N+I
Sbjct: 70 ASHLKNLI 77
Score = 33.1 bits (72), Expect = 4.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 464 EDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
EDV +AA I++ T +K D R F DG+Y+
Sbjct: 143 EDVGQTAANIEQKTKIKRFDPRIFQDGIYI 172
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQKD 437
GV+KGF Y ++ VY+HFPI+ + + + I N G K I + V V + K
Sbjct: 83 GVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKK 142
Query: 438 ELII 449
E+I+
Sbjct: 143 EIIL 146
Score = 39.1 bits (87), Expect = 0.069
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 19 MKQIVANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDI--RMVNPRLLKVEKW 192
MK ++ +P V + +K + + KG G L + F + +I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 193 FGSKKELAAVRTVCSHVENMI 255
+ +K A VRT+ S + NMI
Sbjct: 61 YNNKSSSAIVRTITSIIYNMI 81
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEK 374
GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK
Sbjct: 76 GVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEK 112
Score = 33.5 bits (73), Expect = 3.4
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 461 LEDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
+E V +AA I++ T + +KD+R F DG+Y+
Sbjct: 139 IEAVGQTAADIEQLTRINDKDVRVFQDGVYI 169
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAP 401
+GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 80 RGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
Score = 33.5 bits (73), Expect = 3.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 464 EDVSSSAALIQESTTVKNKDIRKFXDGLYV 553
E V +AA I+ S +KN+D R F DG+Y+
Sbjct: 149 EKVGQTAANIERSCRIKNRDRRVFQDGIYI 178
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 44.0 bits (99), Expect = 0.002
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQK 434
+G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ + V+ PK +
Sbjct: 82 EGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGE 137
Query: 435 DELIIEGTLW 464
D +++ G +W
Sbjct: 138 D-VLLTGEVW 146
Score = 37.5 bits (83), Expect = 0.21
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 467 DVSSSAALIQESTTVKNKDIRKFXDGLYVF 556
D++ +AA I+ +T VKNKD R F DG+YV+
Sbjct: 148 DITQTAANIELTTKVKNKDHRVFLDGIYVY 177
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQK 434
KGVT+G +YK++ VY+HFP + + I NF+GE P V + P +
Sbjct: 97 KGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGEN-------VPRVAEIVDP-EN 148
Query: 435 DELIIEG 455
E+I++G
Sbjct: 149 TEVIVQG 155
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 43.6 bits (98), Expect = 0.003
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEKYIXRVKMAPGVTVVNSPKQK 434
+GV G+ K++ VYAHFPI + +G ++I + NF GE+ + K+ G VV+ +
Sbjct: 64 EGVGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSARKAKIVGGTKVVS---KG 118
Query: 435 DELIIEG 455
+++I+ G
Sbjct: 119 EDVIVTG 125
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +2
Query: 455 HSLEDVSSSAALIQESTTVKNKDIRKFXDGLYVF 556
H L DVS +AA +++ T VKNKD R F DG+YV+
Sbjct: 126 HVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVY 159
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIXIRNFLGEK 374
KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+
Sbjct: 79 KGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGER 116
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 37.5 bits (83), Expect = 0.21
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Frame = +1
Query: 85 RLVTVKGPRGVLKRNFKHLAXDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 237
+L+ + GPRG+L RNFKH + DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 238 HVENMIK 258
++NMI+
Sbjct: 113 QIKNMIR 119
>UniRef50_UPI00015B4F87 Cluster: PREDICTED: similar to
prophenoloxidase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to prophenoloxidase - Nasonia
vitripennis
Length = 994
Score = 37.1 bits (82), Expect = 0.28
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = -1
Query: 416 NDSHTRCHLYPSDVFLTQEVTYXNN*ITLSGDTVNGEVSIHSTHLVLEAFSYSFIMFSTC 237
N + CH SD+ L++ + + T G V HL + FSYSF++ +T
Sbjct: 751 NPNTLNCHWTKSDIDLSRGLDF----------TPRGSVLARLQHLNHDEFSYSFVVNNTN 800
Query: 236 EQTVLTAASSFLDPNHFSTFRRRGFT-MRMSXAKCLKFLLRTPRG 105
Q V F+ P + T R F R+ + KF R RG
Sbjct: 801 NQEVTGTVRVFIAPKYDETGRALSFNDQRLLMIEMDKFTTRLRRG 845
>UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2;
Clostridium|Rep: Signal peptidase I precursor -
Clostridium cellulolyticum H10
Length = 189
Score = 34.3 bits (75), Expect = 2.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 280 YWKPLVTPLSCSLHVNRLSXRRQAPFWIRTISQPSGDE 167
+W ++ PL ++ V+R S Q FW++ + +GDE
Sbjct: 80 FWDNVIDPLKYNILVSRFSDNNQQVFWVKRVIGKAGDE 117
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 33.9 bits (74), Expect = 2.6
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 52 IPXXVTVXVKSRLVTVKGPRGVLKRNFKHLAXDIRM-VNPRLLKVEKWFGSKKELAAVRT 228
IP V + + + VTVKGP+G L R L D+++ + +L VE+ K+ A T
Sbjct: 11 IPEGVELKLDNNTVTVKGPKGELSR---ELHPDMKINIEDNVLTVERPSDHKEHRALHGT 67
Query: 229 VCSHVENMI 255
S + NM+
Sbjct: 68 TRSLINNMV 76
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 33.5 bits (73), Expect = 3.4
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 31 VANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNF 132
+A + +P VTV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p -
Drosophila melanogaster (Fruit fly)
Length = 730
Score = 33.1 bits (72), Expect = 4.5
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +1
Query: 178 KVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLL 348
++E+ G++ E A+++ H+E +KE +K + C+ L SP+ + R+ QLL
Sbjct: 316 RLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRS-RIEQLL 371
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 32.3 bits (70), Expect = 7.9
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 449 ND*FILLFXRVNDSHTRCHLYPSDVFLTQEVTYXNN*ITL--SGDTVNGEVSIHSTHLVL 276
N+ FILL R T S+ F TQE++ N +T+ + VN E+ I+ +HLV
Sbjct: 63 NNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVF 122
Query: 275 EAFS 264
FS
Sbjct: 123 VTFS 126
>UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia
fuckeliana B05.10|Rep: Citrate synthase - Botryotinia
fuckeliana B05.10
Length = 534
Score = 32.3 bits (70), Expect = 7.9
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 338 ITLSGDTVNGEVSIHSTHLVLEAFSYSFIMFS 243
+ L GD G VS H+THLV A S F+ +S
Sbjct: 297 LALHGDHEGGNVSAHTTHLVGSALSDPFLSYS 328
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 32.3 bits (70), Expect = 7.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 31 VANQKXXIPXXVTVXVKSRLVTVKGPRGVLKRNFKH 138
+ N+ IP VTV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 32.3 bits (70), Expect = 7.9
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VANQKXXIPXXVTVXVK-SRLVTVKGPRGVLKRNFKHLAXDIRMVNPRLLKVEKWFGSKK 207
V + IP VTV + + V VKGP+G L R F H +I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 208 ELAAVRTVCSHVENMIK 258
A T S + NM++
Sbjct: 62 HRALHGTTRSLLGNMVE 78
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,826,335
Number of Sequences: 1657284
Number of extensions: 9506039
Number of successful extensions: 18915
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 18506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18896
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -