Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0331
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.58 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.8  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 197 PNHFSTFRRRGFTMRMSXAKCLKFLL 120
           PN ++ F  + +T +    KC+K+L+
Sbjct: 33  PNFYNDFEVQRYTWKCENQKCVKYLV 58


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 511 DCSRFLDESSRARDIFQRVPSMISSSFCXGE 419
           D  RFL E+ + R  F  +P    S  C G+
Sbjct: 408 DPDRFLPENIQKRHPFAYIPFSAGSRNCIGQ 438


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 511 DCSRFLDESSRARDIFQRVPSMISSSFCXGE 419
           D  RFL E+ + R  F  +P    S  C G+
Sbjct: 408 DPDRFLPENIQKRHPFAYIPFSAGSRNCIGQ 438


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,948
Number of Sequences: 336
Number of extensions: 2442
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)