Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0330
         (551 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55495| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   8e-05
SB_59428| Best HMM Match : Ank (HMM E-Value=2.2)                       28   5.8  
SB_33129| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_28895| Best HMM Match : p450 (HMM E-Value=0)                        27   7.7  

>SB_55495| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 858

 Score = 44.0 bits (99), Expect = 8e-05
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
 Frame = +1

Query: 118 QALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESTSKPF*TVLSLLWF 297
           +A E+R + K  GA++ EE S   ++D+L +I+  C  CFKE +E  S    ++LSL+  
Sbjct: 49  KAQEIRTFLKEQGADLKEE-SITPLQDELAEILECCQVCFKEDAELES-VMNSILSLVLV 106

Query: 298 LYH*KEEKTLS-*HLVKGSLRLLGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 474
           +   + E        +K ++           L+ L  L++ L    P+R+ VY   + +A
Sbjct: 107 VPEKRNELIKKCCDKLKANMSEDENSSAAARLRVLSVLFSGLPEKDPMRHEVYCTQLTIA 166

Query: 475 A 477
           A
Sbjct: 167 A 167


>SB_59428| Best HMM Match : Ank (HMM E-Value=2.2)
          Length = 351

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 424 PNSPLRYHVYYHVIE 468
           P+ PL YH +YHVI+
Sbjct: 288 PDDPLDYHFFYHVID 302


>SB_33129| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 20/60 (33%), Positives = 25/60 (41%)
 Frame = -1

Query: 395 DCKATIPSLGPRSLSEPLTKC*DKVFSSF*WYRNHNRDNTVQNGFDVDSLGSLKQASQTP 216
           +C  T PS     LS       + V S   WY    R N V+NGFD+  L    +A   P
Sbjct: 44  NCAVTHPSTNRALLSLTSVIGREPVLSQ--WY-GRRRQNCVRNGFDITVLTRYSEAVTHP 100


>SB_28895| Best HMM Match : p450 (HMM E-Value=0)
          Length = 492

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +1

Query: 130 LRRYFKSLGAEISEEKSPKGIEDDLHKIVGV 222
           LR+YF SLG  I++E +   +ED L+  VGV
Sbjct: 134 LRKYFPSLGDTIAKELAK--LEDKLNSDVGV 162


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,260,124
Number of Sequences: 59808
Number of extensions: 305539
Number of successful extensions: 842
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)