Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0330
         (551 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR450300-1|CAG29296.1|  374|Homo sapiens GA17 protein.                 92   1e-18
BC051292-1|AAH51292.1|  374|Homo sapiens eukaryotic translation ...    92   1e-18
BC019103-1|AAH19103.1|  374|Homo sapiens PCI domain containing 1...    92   1e-18
AY769947-1|AAX12524.1|  374|Homo sapiens fetal lung protein B5 p...    92   1e-18
AK222564-1|BAD96284.1|  374|Homo sapiens dendritic cell protein ...    92   1e-18
AF064603-1|AAC17108.1|  374|Homo sapiens GA17 protein protein.         92   1e-18
DQ185042-1|ABD14422.1|  136|Homo sapiens dendritic cell protein ...    88   2e-17

>CR450300-1|CAG29296.1|  374|Homo sapiens GA17 protein.
          Length = 374

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 55/134 (41%), Positives = 78/134 (58%)
 Frame = +1

Query: 76  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 255
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59

Query: 256 TSKPF*TVLSLLWFLYH*KEEKTLS*HLVKGSLRLLGPKLGMVALQSLWRLYNNLEPNSP 435
                 +V+SLL  L   K+E  +   L +  ++    +   + LQ L  L++ ++ N+P
Sbjct: 60  VESVMNSVVSLLLILEPDKQEALIE-SLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 436 LRYHVYYHVIELAA 477
           +RY VY  +I++AA
Sbjct: 119 VRYTVYCSLIKVAA 132


>BC051292-1|AAH51292.1|  374|Homo sapiens eukaryotic translation
           initiation factor 3, subunit M protein.
          Length = 374

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 55/134 (41%), Positives = 78/134 (58%)
 Frame = +1

Query: 76  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 255
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59

Query: 256 TSKPF*TVLSLLWFLYH*KEEKTLS*HLVKGSLRLLGPKLGMVALQSLWRLYNNLEPNSP 435
                 +V+SLL  L   K+E  +   L +  ++    +   + LQ L  L++ ++ N+P
Sbjct: 60  VESVMNSVVSLLLILEPDKQEALIE-SLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 436 LRYHVYYHVIELAA 477
           +RY VY  +I++AA
Sbjct: 119 VRYTVYCSLIKVAA 132


>BC019103-1|AAH19103.1|  374|Homo sapiens PCI domain containing 1
           (herpesvirus entry mediator) protein.
          Length = 374

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 55/134 (41%), Positives = 78/134 (58%)
 Frame = +1

Query: 76  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 255
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59

Query: 256 TSKPF*TVLSLLWFLYH*KEEKTLS*HLVKGSLRLLGPKLGMVALQSLWRLYNNLEPNSP 435
                 +V+SLL  L   K+E  +   L +  ++    +   + LQ L  L++ ++ N+P
Sbjct: 60  VESVMNSVVSLLLILEPDKQEALIE-SLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 436 LRYHVYYHVIELAA 477
           +RY VY  +I++AA
Sbjct: 119 VRYTVYCSLIKVAA 132


>AY769947-1|AAX12524.1|  374|Homo sapiens fetal lung protein B5
           protein.
          Length = 374

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 55/134 (41%), Positives = 78/134 (58%)
 Frame = +1

Query: 76  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 255
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59

Query: 256 TSKPF*TVLSLLWFLYH*KEEKTLS*HLVKGSLRLLGPKLGMVALQSLWRLYNNLEPNSP 435
                 +V+SLL  L   K+E  +   L +  ++    +   + LQ L  L++ ++ N+P
Sbjct: 60  VESVMNSVVSLLLILEPDKQEALIE-SLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 436 LRYHVYYHVIELAA 477
           +RY VY  +I++AA
Sbjct: 119 VRYTVYCSLIKVAA 132


>AK222564-1|BAD96284.1|  374|Homo sapiens dendritic cell protein
           variant protein.
          Length = 374

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 55/134 (41%), Positives = 78/134 (58%)
 Frame = +1

Query: 76  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 255
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59

Query: 256 TSKPF*TVLSLLWFLYH*KEEKTLS*HLVKGSLRLLGPKLGMVALQSLWRLYNNLEPNSP 435
                 +V+SLL  L   K+E  +   L +  ++    +   + LQ L  L++ ++ N+P
Sbjct: 60  VESVMNSVVSLLLILEPDKQEALIE-SLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 436 LRYHVYYHVIELAA 477
           +RY VY  +I++AA
Sbjct: 119 VRYTVYCSLIKVAA 132


>AF064603-1|AAC17108.1|  374|Homo sapiens GA17 protein protein.
          Length = 374

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 55/134 (41%), Positives = 77/134 (57%)
 Frame = +1

Query: 76  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 255
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKD 59

Query: 256 TSKPF*TVLSLLWFLYH*KEEKTLS*HLVKGSLRLLGPKLGMVALQSLWRLYNNLEPNSP 435
                 +V+SLL  L   K+E  +   L +  ++    +   + LQ L  L++ ++ N+P
Sbjct: 60  VESVVNSVVSLLLILEPDKQEALIE-SLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 436 LRYHVYYHVIELAA 477
           +RY VY  +IE+ A
Sbjct: 119 VRYTVYCSLIEVVA 132


>DQ185042-1|ABD14422.1|  136|Homo sapiens dendritic cell protein
           GA17 protein.
          Length = 136

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 51/128 (39%), Positives = 74/128 (57%)
 Frame = +1

Query: 94  FMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESTSKPF* 273
           F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  +       
Sbjct: 3   FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKDVESVMN 62

Query: 274 TVLSLLWFLYH*KEEKTLS*HLVKGSLRLLGPKLGMVALQSLWRLYNNLEPNSPLRYHVY 453
           +V+SLL  L   K+E  +   L +  ++    +   + LQ L  L++ ++ N+P+R  VY
Sbjct: 63  SVVSLLLILEPDKQEALIE-SLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRCTVY 121

Query: 454 YHVIELAA 477
             +I++AA
Sbjct: 122 CSLIKVAA 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,706,371
Number of Sequences: 237096
Number of extensions: 1556540
Number of successful extensions: 3105
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3092
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)