Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0328
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 114 3e-26
07_01_0578 + 4295386-4296489,4297394-4297507 114 4e-26
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.075
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.100
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.13
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.23
09_02_0476 + 9728729-9730739,9730930-9730991 31 0.40
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 31 0.53
05_03_0163 + 9070781-9071320 31 0.70
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 1.2
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 1.6
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 2.1
10_07_0029 + 12031711-12032464,12044289-12044386 28 3.7
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 28 5.0
07_01_0469 - 3552409-3553368 28 5.0
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 5.0
05_05_0285 - 23855219-23855371,23855391-23856063,23856239-238563... 28 5.0
04_01_0244 - 3194141-3195091,3195301-3195312 28 5.0
03_01_0147 - 1170481-1171260,1171332-1171511 28 5.0
03_01_0092 - 731069-731434,731569-733080 28 5.0
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 28 5.0
07_03_1636 + 28290642-28291574 27 6.5
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 27 6.5
04_03_1022 - 21778315-21779007 27 6.5
01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078 27 6.5
09_06_0153 - 21243108-21245660 27 8.7
01_06_1536 + 38075023-38075359,38075834-38075963,38076204-380764... 27 8.7
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 114 bits (275), Expect = 3e-26
Identities = 54/85 (63%), Positives = 56/85 (65%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLR 123
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIE 508
ARGH IE
Sbjct: 124 RIAVASALAATAVPSLVLARGHRIE 148
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +1
Query: 76 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRRR 246
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY V RR
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRR 60
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 114 bits (274), Expect = 4e-26
Identities = 53/85 (62%), Positives = 56/85 (65%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLR 124
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIE 508
ARGH IE
Sbjct: 125 RVAVASALAATSVPSLVLARGHRIE 149
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +1
Query: 85 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRRR 246
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY V RR
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRR 61
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.075
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 263 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.100
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 369 PPRHMLPKAP*PDLWVPPP 313
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.3 bits (70), Expect = 0.23
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>09_02_0476 + 9728729-9730739,9730930-9730991
Length = 690
Score = 31.5 bits (68), Expect = 0.40
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 173 VRTWSMMFTFLCPRTRGSPTA*EGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQG 343
+R + + LCP T GS WS++S++ G G A A P GGG G G
Sbjct: 118 IRAFCAAASLLCPTTPGS------SWSKSSSD--GDGAAAAAAPAGGGGGGGGGGDG 166
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 31.1 bits (67), Expect = 0.53
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = +2
Query: 212 RTRGSPTA*EGGWSQTSAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGRM 376
+ G+ + EGG S S S G++V + + R+R H G G+ G++ + GG+M
Sbjct: 65 KVSGAKSTDEGGGSDKSKGS-EVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGKM 123
Query: 377 FAPTKP-WR 400
P P WR
Sbjct: 124 LRPGFPKWR 132
>05_03_0163 + 9070781-9071320
Length = 179
Score = 30.7 bits (66), Expect = 0.70
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 242 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQG 343
GGWSQ AE WG G ++ GGG RS +G
Sbjct: 18 GGWSQR-AEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 48 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = -2
Query: 384 GANIRPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPPSHAVGLP 220
G PP P AP P P P G + P P +A +PP G P
Sbjct: 317 GTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPP 371
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 374 YVHHDTCYRRHPDRTYG 324
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 321 PPPRTRGIRATARPVPHDSALVCDQPPSHAVGLP 220
PPP ++G A P P + V ++PP +P
Sbjct: 163 PPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVP 196
>07_01_0469 - 3552409-3553368
Length = 319
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 374 YVHHDTCYRRHPDRTYG 324
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRFHPRRASG 110
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 350 RRHPDRTYGYHHHGHAEFGQQHVRYPMI 267
R H D +G+HHH H G H P +
Sbjct: 68 RAHGDHHHGHHHHHHGH-GHSHHHGPEV 94
>05_05_0285 -
23855219-23855371,23855391-23856063,23856239-23856301,
23856478-23856604,23856751-23856897,23856968-23856974,
23857203-23857379
Length = 448
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 394 LAALAPSRQPPTAESGLGSSRCCYWRPSARS 486
+A AP AESG+G+ C +WR S S
Sbjct: 306 IAKDAPPAVEVKAESGVGTLGCAFWRTSLGS 336
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 374 YVHHDTCYRRHPDRTYG 324
Y+ HDT YR HP R G
Sbjct: 98 YIFHDTAYRFHPRRANG 114
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 GIASLK*R-NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 203
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 366 PRHMLPKAP*PDLWVPPPRTRGIRATARPVP 274
P H++P P P L P P+++ R P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 321 PPPRTRGIRATARPVPHDSA-LVCDQPP 241
PPPRTR + PVP SA + QPP
Sbjct: 166 PPPRTRQVNPAPPPVPSPSAPPLPPQPP 193
>07_03_1636 + 28290642-28291574
Length = 310
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 369 PPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPP 241
PP + AP +VPPP +R + P P + L PP
Sbjct: 154 PPPQLFETAPPSPPYVPPPPDAYLRKPSPPSPPPAKLSPPPPP 196
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 157 IRTGGAWLHPAPSHSSLN-TPTLKVGLPIDSF 65
+R+ WL P P+H ++N L + +P+D F
Sbjct: 865 LRSYITWLKPTPAHVAMNPAEALAMQIPVDHF 896
>04_03_1022 - 21778315-21779007
Length = 230
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -2
Query: 366 PRHMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPPSH 235
P H+LP +P P W P T P P + P H
Sbjct: 49 PPHLLPPSPAPQQWYDHPPNYHPPHTPAPAPAPGPYIPPHHPHH 92
>01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078
Length = 455
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +2
Query: 230 TA*EGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQ--GAFGNMCRGGRMFAPTKPWRR 403
TA GG S S G + GGG R G GA G + GG + WRR
Sbjct: 70 TATVGGGDDGSGHSGGRSSPPGWLRPAGGGGRRRGGHGGGAGGGVGAGG----GAEWWRR 125
Query: 404 W 406
W
Sbjct: 126 W 126
>09_06_0153 - 21243108-21245660
Length = 850
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 134 APCTVSLFSEYTDTKGRATDRLISLL*RSYTSEIYTNSGDK 12
APCTV +F++ +G A+ RL + + S + N GD+
Sbjct: 612 APCTVGVFADRPFWRGGASFRLPTKISTSEETTAARNQGDQ 652
>01_06_1536 +
38075023-38075359,38075834-38075963,38076204-38076419,
38076520-38077137,38077226-38078075
Length = 716
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 103 YSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVR 240
Y E +T+ G L F + PIR L N + + + + RQ VR
Sbjct: 275 YQEAVDTLSGIQLALYFSHRQPIRTPLQNTIALYWALSDRQLVTVR 320
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,767,887
Number of Sequences: 37544
Number of extensions: 345924
Number of successful extensions: 1601
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1591
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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