Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0328
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 120 7e-28
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 37 0.008
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 37 0.011
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 34 0.077
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 32 0.31
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 30 0.95
SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 30 1.3
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_18018| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17) 28 5.1
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 28 5.1
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 27 6.7
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 27 6.7
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 27 6.7
SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 27 8.9
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 27 8.9
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09) 27 8.9
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 27 8.9
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 120 bits (289), Expect = 7e-28
Identities = 56/85 (65%), Positives = 57/85 (67%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 58 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVNVQQR 117
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIE 508
ARGH IE
Sbjct: 118 RFAVCSALAASALPALIMARGHRIE 142
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +1
Query: 82 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRR 243
ARP+++V++E E+ LP VFKAPIRPDLVN VH +++KN RQPY V +
Sbjct: 2 ARPVITVFNENGESA--GQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNK 53
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 242 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 403
GGW Q WG G+ + R GGG R G +G M GG P W R
Sbjct: 14 GGWGQGPGGGWGRGQG-GGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 66
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 242 GGWSQTSAESWGT--GRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 397
GG + WG G + R P GGG R G +G M GG P + W
Sbjct: 54 GGMGRGPGGGWGRMQGGGMGRGP---GGGLGRGPGGGWGRMQEGGMGRGPGQGW 104
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 242 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 403
GGW Q WG G+ + R GGG R G +G M GG P W R
Sbjct: 258 GGWGQGPGGGWGRGQGRG-MGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 310
Score = 30.7 bits (66), Expect = 0.72
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = +2
Query: 218 RGSPTA*EGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 397
RG GGW + S WG R++GGG R G +G M +GG P W
Sbjct: 274 RGMGRGPGGGWGRGSGGGWG---------RMQGGGMGRGPGGGWGRM-QGGMGRGPGGGW 323
Query: 398 RR 403
R
Sbjct: 324 GR 325
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 33.9 bits (74), Expect = 0.077
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 368 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWF 255
HH CY H Y Y+ H H + + H YP RH++
Sbjct: 20 HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRHYY 54
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 31.9 bits (69), Expect = 0.31
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 209 PRTRGSPTA*EGGWSQTSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 373
P R SP+ T +E +G ++ R PR RGGG G G G RGGR
Sbjct: 967 PSHRSSPSTPGSPSIPTPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 30.3 bits (65), Expect = 0.95
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Frame = -3
Query: 368 HHDTCYRRHPDRTYGYHHHGHAEFGQQH-------VRYPMIRHWFVTSLL 240
HH RH R + +HHH H E+ ++H + +IRH F+ ++
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRHRYFTDINITIQIIRHHFIIIII 373
>SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 327 WVPPPRTRGIRATARPVPHD 268
W+PP RTR R T PV H+
Sbjct: 228 WMPPVRTRPARPTVMPVTHE 247
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 368 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFVTSLLL 237
HH + RH R + YHHH + H +P FVT++++
Sbjct: 570 HHHLHHHRHHHRHHHYHHHHY----PHHHHHPCTIIIFVTTIII 609
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 377 TYVHHDTCYRRHPDRTYGYHHHGHA 303
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 353 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 261
Y +HP T+ YHH H + ++ ++P + H
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTH 442
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 353 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 261
Y +HP T+ YH H + H ++P + H
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTH 261
>SB_18018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 279 VPHDSALVCDQPPSHAVGLPRVLGHR 202
+ HD ++ PPS A G+P VL HR
Sbjct: 141 IAHDPEILSMIPPSEATGIPFVLLHR 166
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 149 GRGLAAPCTVSLFSEYTDTKGRATDRLI 66
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17)
Length = 278
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 359 TCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFVTSLL 240
TC+ HP + Y H+ H F Q H + RH+ TS L
Sbjct: 52 TCFPYHPHYHHHYRHNDH-YFHQDH----LYRHYLSTSAL 86
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = -2
Query: 366 PRHMLPKAP*PDLWVPPPRTRGIR-ATARPVPHDSALVCDQPP-SHAVGLPRV 214
P + P P P PPPR R P P S QPP S VG P V
Sbjct: 246 PPSVKPSVPIPPPTKPPPRVASRRPPPPLPPPDSSEAQAQQPPLSPPVGKPVV 298
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 372 RPPRHMLPKAP*PDLWVPPPRTRGIRATARPVPHD 268
RPP H + P PD WVP P R +P D
Sbjct: 250 RPPPHHDMRGP-PDQWVPGPEQRRDNMRGPGMPPD 283
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 27.5 bits (58), Expect = 6.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 368 HHDTCYRRHPDRTYGYHHH 312
HH YR H + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 374 YVHHDTCYRRHPDRTYGYHHHGH 306
Y HH +RR R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
>SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 377 TYVHHDTCYRRHPDRTYGYHHHGHA 303
TY H DT +HPD H HA
Sbjct: 323 TYTHQDTQMHKHPDTQMYVHAPRHA 347
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 27.1 bits (57), Expect = 8.9
Identities = 8/31 (25%), Positives = 12/31 (38%)
Frame = -3
Query: 368 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 276
HH + H + +HHH H H +
Sbjct: 213 HHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 368 HHDTCYRRHPDRTYGYHHHGH 306
HH + RH DR + + HH H
Sbjct: 340 HHRNKHYRHHDRNHHHRHHHH 360
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/45 (24%), Positives = 18/45 (40%)
Frame = -3
Query: 368 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFVTSLLLT 234
HH + H + + HH H QH + H +T + +T
Sbjct: 6 HHHHDHHHHDHHHHDHQHHDHQHHDHQHHDHHHHDHHHMTIITMT 50
>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
Length = 304
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/47 (21%), Positives = 20/47 (42%)
Frame = -3
Query: 374 YVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFVTSLLLT 234
Y HH + H + +HHH H + + +T++++T
Sbjct: 158 YYHHHLLHHHHHHWHHHHHHHRHHHHSFTTIATTTVITTIITTVIIT 204
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 390 FVGANIRPPRHMLPKAP*PDLWVPPP 313
F G +RPPRH+ ++P P PPP
Sbjct: 321 FAGPTLRPPRHLPWQSPPPP---PPP 343
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,577,096
Number of Sequences: 59808
Number of extensions: 336434
Number of successful extensions: 1135
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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