SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0324
         (556 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208808-1|BAD92045.1|  179|Homo sapiens TNFRSF14 protein varian...    33   0.51 
D79986-1|BAA11481.2|  929|Homo sapiens KIAA0164 protein.               31   2.1  
BC132780-1|AAI32781.1|  920|Homo sapiens BCL2-associated transcr...    31   2.1  
BC078160-1|AAH78160.1|  680|Homo sapiens BCLAF1 protein protein.       31   2.1  
BC063846-1|AAH63846.1|  705|Homo sapiens BCLAF1 protein protein.       31   2.1  
BC056894-1|AAH56894.1|  680|Homo sapiens BCLAF1 protein protein.       31   2.1  
BC047887-1|AAH47887.1|  689|Homo sapiens BCLAF1 protein protein.       31   2.1  
BC047687-1|AAH47687.1|  507|Homo sapiens BCLAF1 protein protein.       31   2.1  
BC016682-1|AAH16682.1|  680|Homo sapiens Unknown (protein for IM...    31   2.1  
AL121713-4|CAB96722.1|  920|Homo sapiens protein ( Human DNA seq...    31   2.1  
AF249273-1|AAF64304.1|  869|Homo sapiens Bcl-2-associated transc...    31   2.1  
AY894575-1|AAX85114.1| 1214|Homo sapiens NBPF1 protein.                30   6.3  
AF379626-1|AAO15394.1|  502|Homo sapiens AC3 protein.                  30   6.3  
AF379622-1|AAO15391.1|  358|Homo sapiens AB18 protein.                 30   6.3  
AF379627-1|AAO15395.1|   96|Homo sapiens AD1 protein.                  29   8.3  

>AB208808-1|BAD92045.1|  179|Homo sapiens TNFRSF14 protein variant
           protein.
          Length = 179

 Score = 33.5 bits (73), Expect = 0.51
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 308 RTSHPLE-AAADRRNPQVRRQGPHDVSAQSFCSARTTPQTRLSXSSTSPILMS 463
           RT HPL  A   +  P   R GP+ +S  + C  R     R   +S SP+ +S
Sbjct: 121 RTLHPLSMATVPQEGPGCPRPGPNPISMDAPCRGRLEVSLRPPSTSVSPLTLS 173


>D79986-1|BAA11481.2|  929|Homo sapiens KIAA0164 protein.
          Length = 929

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 69  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 127

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 128 SVSSQRSRSRSRRSYRSSRSP 148


>BC132780-1|AAI32781.1|  920|Homo sapiens BCL2-associated
           transcription factor 1 protein.
          Length = 920

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 60  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 118

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 119 SVSSQRSRSRSRRSYRSSRSP 139


>BC078160-1|AAH78160.1|  680|Homo sapiens BCLAF1 protein protein.
          Length = 680

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 60  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 118

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 119 SVSSQRSRSRSRRSYRSSRSP 139


>BC063846-1|AAH63846.1|  705|Homo sapiens BCLAF1 protein protein.
          Length = 705

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 60  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 118

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 119 SVSSQRSRSRSRRSYRSSRSP 139


>BC056894-1|AAH56894.1|  680|Homo sapiens BCLAF1 protein protein.
          Length = 680

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 60  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 118

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 119 SVSSQRSRSRSRRSYRSSRSP 139


>BC047887-1|AAH47887.1|  689|Homo sapiens BCLAF1 protein protein.
          Length = 689

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 60  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 118

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 119 SVSSQRSRSRSRRSYRSSRSP 139


>BC047687-1|AAH47687.1|  507|Homo sapiens BCLAF1 protein protein.
          Length = 507

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 60  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 118

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 119 SVSSQRSRSRSRRSYRSSRSP 139


>BC016682-1|AAH16682.1|  680|Homo sapiens Unknown (protein for
           IMAGE:3923680) protein.
          Length = 680

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 60  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 118

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 119 SVSSQRSRSRSRRSYRSSRSP 139


>AL121713-4|CAB96722.1|  920|Homo sapiens protein ( Human DNA
           sequence from clone CTA-211L9 on chromosome 6 Contains
           thegene for KIAA0164 protein, the 5' end of a novel gene
           and two CpG  ).
          Length = 920

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 60  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 118

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 119 SVSSQRSRSRSRRSYRSSRSP 139


>AF249273-1|AAF64304.1|  869|Homo sapiens Bcl-2-associated
           transcription factor short form protein.
          Length = 869

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 215 DWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSH-PLEAAADRRNPQVRRQGPHDVSAQ 391
           D+   R      G R  GRG  Y G  GR HR  + P+      R+P+  R        +
Sbjct: 58  DYRNNRGMRRPYGYRGRGRG-YYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 116

Query: 392 SFCSARTTPQTRLS-XSSTSP 451
           S  S R+  ++R S  SS SP
Sbjct: 117 SVSSQRSRSRSRRSYRSSRSP 137


>AY894575-1|AAX85114.1| 1214|Homo sapiens NBPF1 protein.
          Length = 1214

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 398  RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 279
            R SG    V+   VL+DS+D+      + F++ D + HYR
Sbjct: 1134 RLSGMLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYR 1173


>AF379626-1|AAO15394.1|  502|Homo sapiens AC3 protein.
          Length = 502

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 398 RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 279
           R SG    V+   VL+DS+D+      + F++ D + HYR
Sbjct: 422 RLSGMLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYR 461


>AF379622-1|AAO15391.1|  358|Homo sapiens AB18 protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 398 RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 279
           R SG    V+   VL+DS+D+      + F++ D + HYR
Sbjct: 278 RLSGMLMEVEEPEVLQDSLDRCYSTPSMYFELPDSFQHYR 317


>AF379627-1|AAO15395.1|   96|Homo sapiens AD1 protein.
          Length = 96

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 398 RSSGQRHRVDPVSVLEDSVDQLRLPVDVRFDVLDHYTHYR 279
           R SG    V+   +L+DS+D+    + + F++ D + HYR
Sbjct: 16  RLSGVLMEVEEPEILQDSLDRCYSTLSLFFELPDSFQHYR 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,793,153
Number of Sequences: 237096
Number of extensions: 1080634
Number of successful extensions: 3470
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3469
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -