Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0324
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          25   0.68 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.6  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   3.6  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   3.6  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   3.6  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   3.6  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   3.6  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   3.6  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   4.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   4.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   4.8  

>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +2

Query: 203 RSEEDWHKTRNSF*SIGKRSPGRGELYNGYSGREHRTSHPLEAAADRRNPQVRR 364
           R E+  H+ RNS+ + G+RS  R         R +   H +E    R     RR
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRR 286


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 266 GRGELYNGYSGREHRTSHPL 325
           GRG ++ G+  RE  + +PL
Sbjct: 53  GRGTIFEGHDDREQPSVYPL 72


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 309 EPHIHWKPQLIDGI 350
           + H+ WKP   DGI
Sbjct: 101 DSHLSWKPSDFDGI 114


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 203 RSEEDWHKTRNSF*SIGKRSPGR 271
           R E+  H+ RNS+ + G+RS  R
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSR 255


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 203 RSEEDWHKTRNSF*SIGKRSPGR 271
           R E+  H+ RNS+ + G+RS  R
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSR 255


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 203 RSEEDWHKTRNSF*SIGKRSPGR 271
           R E+  H+ RNS+ + G+RS  R
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSR 255


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 203 RSEEDWHKTRNSF*SIGKRSPGR 271
           R E+  H+ RNS+ + G+RS  R
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSR 255


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 203 RSEEDWHKTRNSF*SIGKRSPGR 271
           R E+  H+ RNS+ + G+RS  R
Sbjct: 233 RYEDSRHEDRNSYRNDGERSCSR 255


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 141 GTTGRLLRGE 170
           GTTG +LRGE
Sbjct: 16  GTTGNILRGE 25


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 141 GTTGRLLRGE 170
           GTTG +LRGE
Sbjct: 16  GTTGNILRGE 25


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 141 GTTGRLLRGE 170
           GTTG +LRGE
Sbjct: 16  GTTGNILRGE 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,170
Number of Sequences: 438
Number of extensions: 2441
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)