Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0323
         (529 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0309 - 20100231-20100307,20100362-20100503,20100588-201009...    28   5.3  
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741...    27   7.1  
04_03_0358 - 14856490-14856573,14856829-14856874,14857116-148572...    27   7.1  
03_02_0098 + 5608787-5610812,5610956-5611053                           27   7.1  
09_03_0089 + 12265916-12267232                                         27   9.3  
09_03_0056 - 11936264-11939677                                         27   9.3  
06_01_0508 - 3674787-3675140,3675257-3675566,3675672-3675806,367...    27   9.3  

>05_04_0309 -
           20100231-20100307,20100362-20100503,20100588-20100967,
           20101049-20101076,20101182-20101306,20101402-20101457,
           20101709-20101791,20101881-20101949,20102050-20102640
          Length = 516

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 398 SRRKSSLIQLSATFRRITEEGRALSGLL*MWSNLILHI 511
           S R+  L+QLS +  + TE GRA++GL    S  I H+
Sbjct: 205 SLRRLQLMQLSVSTLKATEIGRAVNGLRKHNSQQIRHL 242


>08_02_0076 +
           11967606-11967905,11969125-11969223,11969813-11974124,
           11974177-11974211
          Length = 1581

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -3

Query: 239 YRIAPAXLNAARSDREGSCVLSSHTYRRSDTCTRDNDPCTQEYNAVGR 96
           YRIA     A   + E    L +H Y+R+ T  R+  PC  E    GR
Sbjct: 216 YRIAKQVSEAL--ELESLDYLYAHKYQRTRTDHRETSPCQSEPKVHGR 261


>04_03_0358 -
           14856490-14856573,14856829-14856874,14857116-14857229,
           14857366-14857401,14857822-14857946,14858052-14858117,
           14858295-14858534,14858900-14859001,14859101-14859138,
           14859219-14859321,14859402-14859524,14860666-14860742,
           14860853-14860998,14861077-14861246
          Length = 489

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 319 PVYKHPMIPGYEGFSGHVPYGFQRFGESSKK 411
           P Y HP I   E  +  +P  F++ GE+ K+
Sbjct: 266 PCYHHPEIQELEFKNSSLPSSFRKLGETEKR 296


>03_02_0098 + 5608787-5610812,5610956-5611053
          Length = 707

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 482 TGAHSVLCLLR*FDEKSQRAELVSFFDDSP 393
           +G H  LC ++  D + +RA L +FF + P
Sbjct: 44  SGCHCFLCAIKEPDARLRRASLAAFFRELP 73


>09_03_0089 + 12265916-12267232
          Length = 438

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 504 RIRFDHIYRSPLSALPSS 451
           R RFDH++ SP SAL S+
Sbjct: 185 RTRFDHLFPSPASALRSA 202


>09_03_0056 - 11936264-11939677
          Length = 1137

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 504 RIRFDHIYRSPLSALPSS 451
           R RFDH++ SP SAL S+
Sbjct: 91  RTRFDHLFPSPASALRSA 108


>06_01_0508 -
           3674787-3675140,3675257-3675566,3675672-3675806,
           3675891-3676100,3676193-3677359,3677397-3677587
          Length = 788

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 90  SASXNRIIFLGTRVIVPSTSIGSAIRMARQHTRSFSIRA 206
           +AS +R +F+G     P  +I  A+  A+   ++F IRA
Sbjct: 167 AASFDRALFVGAADSDPFAAIAGAVAAAKSCLKTFRIRA 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,072,746
Number of Sequences: 37544
Number of extensions: 279550
Number of successful extensions: 637
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)