Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0323
         (529 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.3  
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    23   6.3  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 209 QHSEXLVLSDRTADDSRSTV 268
           +HSE  +LSD T+   R++V
Sbjct: 937 RHSERALLSDSTSSSERNSV 956


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
 Frame = -3

Query: 350 YPGIMGCL*TGSPLRKRAFTM--SKSFCAGR*IWSHRPFYRIAPAXLNAARSDREGSCVL 177
           Y G + C    +   +R  T+  ++ FC  +      P+    P       SDR GSC  
Sbjct: 39  YCGHLDCTRVATFKGERFCTLCDTRHFCECKETREPLPYMYACPGTEPCQSSDRLGSCSK 98

Query: 176 SSH 168
           S H
Sbjct: 99  SMH 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,130
Number of Sequences: 2352
Number of extensions: 10709
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)