Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0322
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 28 5.1
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 28 5.1
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 28 5.1
Z78015-5|CAB01432.2| 258|Caenorhabditis elegans Hypothetical pr... 27 6.7
U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical p... 27 6.7
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z81565-3|CAH60773.1| 489|Caenorhabditis elegans Hypothetical
protein K06G5.1b protein.
Length = 489
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +1
Query: 82 FEIYNGSGFSQYRPTALYSWVHGSLSRVQVSDRRYVWLDNTQDPSRSERAAFREAGA 252
F +YNG ++ ++ S +Y++++ TQD + S A + GA
Sbjct: 87 FTLYNGKVADNSTKITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGA 143
>Z81565-2|CAB04581.1| 507|Caenorhabditis elegans Hypothetical
protein K06G5.1a protein.
Length = 507
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +1
Query: 82 FEIYNGSGFSQYRPTALYSWVHGSLSRVQVSDRRYVWLDNTQDPSRSERAAFREAGA 252
F +YNG ++ ++ S +Y++++ TQD + S A + GA
Sbjct: 87 FTLYNGKVADNSTKITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGA 143
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 446 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 497
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 514 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 565
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 72 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 123
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 537 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 588
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 537 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 588
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 59 LFGQKYFFLKFTMALDLVSIAQPHYIPGYTGHCPEYKYRIGDTYGSTTHKIL 214
L G K+F T L+ Q H P YT C K + G H+++
Sbjct: 446 LSGSKHFMGSLTSGQPLLRPIQAHNDPNYTPECIYCKLTFPNEAGLQAHEVV 497
>Z78015-5|CAB01432.2| 258|Caenorhabditis elegans Hypothetical
protein R02D5.3 protein.
Length = 258
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 129 IIFLGTRVIVPSTSIGSAIRMARQHTRSFS 218
+IFL TR V +SIGSAIR+ RS S
Sbjct: 145 LIFLSTRDQVVYSSIGSAIRIDDSIIRSIS 174
>U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical
protein C28H8.11a protein.
Length = 403
Score = 27.5 bits (58), Expect = 6.7
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 208 DPSRSERAAFREAGAIDRTADDFQ-IYRPAQNEIDIVNARFRNGDPVYKHPMIPG 369
DPS +E A + +TAD FQ I P Q+E I RNG+ + H G
Sbjct: 241 DPSNTEEIAKQLTAEYHKTADAFQSILDPRQHEQHI-----RNGNRLLSHDATKG 290
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +1
Query: 148 GSLSRVQVSDRRYVWLDNTQDPSRSERAAFREAGAIDRTADDFQI 282
G++ VSD+ Y W++ R F+ A +I++ D+ ++
Sbjct: 3217 GAIGLKFVSDKSYYWMEEDNKYGRKGSKGFQLAYSINKCGDNIEL 3261
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +1
Query: 148 GSLSRVQVSDRRYVWLDNTQDPSRSERAAFREAGAIDRTADDFQI 282
G++ VSD+ Y W++ R F+ A +I++ D+ ++
Sbjct: 3217 GAIGLKFVSDKSYYWMEEDNKYGRKGSKGFQLAYSINKCGDNIEL 3261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,024,648
Number of Sequences: 27780
Number of extensions: 315951
Number of successful extensions: 891
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -