Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0321
         (415 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   1.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   6.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   6.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   8.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   8.3  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 60  YKTKKCRIKFSTRLFLDTHCRISG 131
           Y+ K C ++FS    L+ H R+ G
Sbjct: 106 YECKLCLLRFSQSGNLNRHMRVHG 129


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 60  YKTKKCRIKFSTRLFLDTHCRISG 131
           Y+ K C ++FS    L+ H R+ G
Sbjct: 362 YECKLCLLRFSQSGNLNRHMRVHG 385


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 148 LSAGPVPDIRQCVSKNN 98
           +S  P+PD+ Q   K+N
Sbjct: 1   MSGAPIPDVGQSWLKSN 17


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 5   SRKGKKVLHRNRPPVFSVLQDKK 73
           +RK     HR +P +FSVL + K
Sbjct: 60  ARKHTLNCHRMKPALFSVLCEIK 82


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 208 PRVQQFFLGH*PLLTLAMSQLS 143
           PR+    LGH   LTL ++ LS
Sbjct: 418 PRLASLNLGHNSQLTLEINGLS 439


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 10/32 (31%), Positives = 12/32 (37%)
 Frame = +3

Query: 60  YKTKKCRIKFSTRLFLDTHCRISGTGPALSCD 155
           Y  + C +KFS    L  H  I        CD
Sbjct: 219 YGCEHCSMKFSDSNQLKAHVLIHTNEKPFECD 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,524
Number of Sequences: 336
Number of extensions: 2066
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)