Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0320
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.2  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    25   2.2  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   5.0  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   5.0  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   5.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.8  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 400 RTQIIFRTGRDRSIASLYFPANENDYTSLVQTLLMHLRGS 281
           R +   + G+    A L   A EN+     Q +L HLRGS
Sbjct: 353 RLEKAIKVGKRAEFAKLIDIAEENELGVGYQVVLSHLRGS 392


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -1

Query: 275 HSGGGFASSFE*ILQVAPSPSXVTQAGQQAXFPACLXRC-SVFLGQTSGGC 126
           ++GG  A     IL+    P     +GQQ   PA +    S+FL +  G C
Sbjct: 158 NAGGRVACGVIGILEPFDEPDSECSSGQQGLLPAAVTVVFSLFLTRXVGXC 208


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 326 LHKLSANSFDAFERLLTHSG 267
           LH LSA S D F+R +  SG
Sbjct: 368 LHLLSALSRDLFQRAILQSG 387


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 326 LHKLSANSFDAFERLLTHSG 267
           LH LSA S D F+R +  SG
Sbjct: 368 LHLLSALSRDLFQRAILQSG 387


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 326 LHKLSANSFDAFERLLTHSG 267
           LH LSA S D F+R +  SG
Sbjct: 254 LHLLSALSRDLFQRAILQSG 273


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 379 TGRDRSIASLYFPANENDYTSLVQTLLMHLRGS 281
           TG+ +         N N Y S  Q +  HLRGS
Sbjct: 358 TGKGQLFQQQIDEVNANVYGSGYQVVTSHLRGS 390


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,058
Number of Sequences: 2352
Number of extensions: 12490
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)