Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0319
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   1.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   5.4  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   5.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   5.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   5.4  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.2  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   7.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   9.5  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 226 DEVQARRRVREDRADGAKVKSVCTFEGNTLKQVQKAPDGLE 348
           DE+    R+ ++  D    K  CT EG  LK  +  PD L+
Sbjct: 30  DEILKNDRLTKNYLDCILEKGKCTPEGEELK--KDIPDALQ 68


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 271 GAKVKSVCTFEGNTLKQVQKAPDG 342
           G      C FEGN +K +    DG
Sbjct: 342 GRPATFTCNFEGNPIKTISWLKDG 365


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 226 DEVQARRRVREDRADGAKVKSVCTFEGNTLKQ 321
           DE+    R+  +  D    K  CT EG  LK+
Sbjct: 31  DEILKNDRLTRNYLDCVLGKGKCTPEGEELKK 62


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 226 DEVQARRRVREDRADGAKVKSVCTFEGNTLKQ 321
           DE+    R+  +  D    K  CT EG  LK+
Sbjct: 31  DEILKNDRLTRNYLDCVLGKGKCTPEGEELKK 62


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 126 SPAKPPTRSPRP 161
           SP  PPT SP P
Sbjct: 94  SPTTPPTPSPPP 105


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 216 LKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSSKFSEEVI 70
           L+  ++  L SS     S   +  L   +VIR TP+V + S+ +  +++
Sbjct: 353 LRFGKILLLVSSTFRTISGRTIEDLFFKKVIRDTPIVAIISNMYKNQIL 401


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 435 PVKGLYSEVGSXCRRFTNI 491
           P+ GLY++  +  R FT++
Sbjct: 73  PLPGLYTKSANTIRSFTHV 91


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 398 VITAFISSGPNSLT*VTSRPSGAFXTC 318
           +ITAF+S  P     +T R  G F  C
Sbjct: 87  LITAFLSVLPQLAWDITYRFYGGFLLC 113


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 226 DEVQARRRVREDRADGAKVKSVCTFEGNTLKQ 321
           DE+    R+  +  D    K  CT EG  LK+
Sbjct: 31  DEILKNDRLTRNYIDCILGKGKCTPEGEELKR 62


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 186 SSPSLRSSTVGVTALAALRVIRPTPMVFMNS 94
           +S S+  +T+G      +R    TPM  MNS
Sbjct: 70  TSSSMGYTTIGSPISNRIRHEMATPMATMNS 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,647
Number of Sequences: 336
Number of extensions: 2357
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)