Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0319
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p pro...   105   4e-23
BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p pro...   103   2e-22
BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p pro...   103   2e-22
AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB...   103   2e-22
AE014297-1318|AAN13511.1|  157|Drosophila melanogaster CG6783-PC...   103   2e-22
BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p pro...    68   1e-11
BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p pro...    68   1e-11
AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA...    68   1e-11

>BT001880-1|AAN71654.1|  142|Drosophila melanogaster SD12036p
           protein.
          Length = 142

 Score =  105 bits (252), Expect = 4e-23
 Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
 Frame = +2

Query: 41  KMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKT 220
           KM FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT
Sbjct: 12  KMSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKT 71

Query: 221 TEMKFKPGEEFERTAL---TVLR*NPYAHSKATPSSKXRRPPTVLKSLT 358
           + + FK G EF+   L    V        +K T   K  +P T+++  T
Sbjct: 72  SAISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 120



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 26/59 (44%), Positives = 32/59 (54%)
 Frame = +1

Query: 256 EDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 432
           E+  DG  VKS+ T +GN L Q QK       T VREF   E+   +T  +V C RVYK
Sbjct: 84  EETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 140


>BT001835-1|AAN71590.1|  130|Drosophila melanogaster RH49003p
           protein.
          Length = 130

 Score =  103 bits (247), Expect = 2e-22
 Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +2

Query: 44  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 223
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 224 EMKFKPGEEFERTAL---TVLR*NPYAHSKATPSSKXRRPPTVLKSLT 358
            + FK G EF+   L    V        +K T   K  +P T+++  T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 26/59 (44%), Positives = 32/59 (54%)
 Frame = +1

Query: 256 EDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 432
           E+  DG  VKS+ T +GN L Q QK       T VREF   E+   +T  +V C RVYK
Sbjct: 72  EETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 128


>BT001757-1|AAN71512.1|  130|Drosophila melanogaster RH06221p
           protein.
          Length = 130

 Score =  103 bits (247), Expect = 2e-22
 Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +2

Query: 44  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 223
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 224 EMKFKPGEEFERTAL---TVLR*NPYAHSKATPSSKXRRPPTVLKSLT 358
            + FK G EF+   L    V        +K T   K  +P T+++  T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 26/59 (44%), Positives = 32/59 (54%)
 Frame = +1

Query: 256 EDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 432
           E+  DG  VKS+ T +GN L Q QK       T VREF   E+   +T  +V C RVYK
Sbjct: 72  EETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 128


>AE014297-1319|AAN13512.1|  130|Drosophila melanogaster CG6783-PB,
           isoform B protein.
          Length = 130

 Score =  103 bits (247), Expect = 2e-22
 Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +2

Query: 44  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 223
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 224 EMKFKPGEEFERTAL---TVLR*NPYAHSKATPSSKXRRPPTVLKSLT 358
            + FK G EF+   L    V        +K T   K  +P T+++  T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 26/59 (44%), Positives = 32/59 (54%)
 Frame = +1

Query: 256 EDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 432
           E+  DG  VKS+ T +GN L Q QK       T VREF   E+   +T  +V C RVYK
Sbjct: 72  EETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 128


>AE014297-1318|AAN13511.1|  157|Drosophila melanogaster CG6783-PC,
           isoform C protein.
          Length = 157

 Score =  103 bits (247), Expect = 2e-22
 Identities = 51/108 (47%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +2

Query: 44  MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 223
           M FVGKKYK+  SENFDE+MK +GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+
Sbjct: 1   MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60

Query: 224 EMKFKPGEEFERTAL---TVLR*NPYAHSKATPSSKXRRPPTVLKSLT 358
            + FK G EF+   L    V        +K T   K  +P T+++  T
Sbjct: 61  AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFT 108


>BT012432-1|AAS93703.1|  117|Drosophila melanogaster RH70437p
           protein.
          Length = 117

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +2

Query: 107 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFERTAL---TVL 277
           + GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+ + FK G EF+   L    V 
Sbjct: 9   SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68

Query: 278 R*NPYAHSKATPSSKXRRPPTVLKSLT 358
                  +K T   K  +P T+++  T
Sbjct: 69  SIITLDGNKLTQEQKGDKPTTIVREFT 95



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 26/59 (44%), Positives = 32/59 (54%)
 Frame = +1

Query: 256 EDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 432
           E+  DG  VKS+ T +GN L Q QK       T VREF   E+   +T  +V C RVYK
Sbjct: 59  EETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 115


>BT003449-1|AAO39452.1|  117|Drosophila melanogaster RH46282p
           protein.
          Length = 117

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +2

Query: 107 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFERTAL---TVL 277
           + GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+ + FK G EF+   L    V 
Sbjct: 9   SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68

Query: 278 R*NPYAHSKATPSSKXRRPPTVLKSLT 358
                  +K T   K  +P T+++  T
Sbjct: 69  SIITLDGNKLTQEQKGDKPTTIVREFT 95



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 26/59 (44%), Positives = 32/59 (54%)
 Frame = +1

Query: 256 EDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 432
           E+  DG  VKS+ T +GN L Q QK       T VREF   E+   +T  +V C RVYK
Sbjct: 59  EETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 115


>AE014297-1320|AAF54655.2|  117|Drosophila melanogaster CG6783-PA,
           isoform A protein.
          Length = 117

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = +2

Query: 107 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFERTAL---TVL 277
           + GVGL+TRK  N+++PTVE+  +GD Y L T+STFKT+ + FK G EF+   L    V 
Sbjct: 9   SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68

Query: 278 R*NPYAHSKATPSSKXRRPPTVLKSLT 358
                  +K T   K  +P T+++  T
Sbjct: 69  SIITLDGNKLTQEQKGDKPTTIVREFT 95



 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 26/59 (44%), Positives = 32/59 (54%)
 Frame = +1

Query: 256 EDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYK 432
           E+  DG  VKS+ T +GN L Q QK       T VREF   E+   +T  +V C RVYK
Sbjct: 59  EETLDGRNVKSIITLDGNKLTQEQKGDK--PTTIVREFTDNELITTLTIGNVKCVRVYK 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,690,635
Number of Sequences: 53049
Number of extensions: 469855
Number of successful extensions: 1826
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1816
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)