Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0319
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 83 2e-16
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 80 9e-16
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 73 1e-13
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 61 5e-10
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 61 5e-10
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 40 0.001
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 33 0.14
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 33 0.14
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 33 0.14
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 32 0.24
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 32 0.24
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 31 0.74
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 29 3.0
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 29 3.0
AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical... 27 6.9
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 9.1
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 9.1
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 27 9.1
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 82.6 bits (195), Expect = 2e-16
Identities = 38/69 (55%), Positives = 52/69 (75%)
Frame = +2
Query: 47 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 226
+F+G+ +K+ +ENFDE+MK IGVGLITRKAA + P +E+R DG+ +N STFK T+
Sbjct: 6 DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64
Query: 227 MKFKPGEEF 253
+ FK GEEF
Sbjct: 65 LSFKLGEEF 73
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 80.2 bits (189), Expect = 9e-16
Identities = 38/75 (50%), Positives = 54/75 (72%)
Frame = +2
Query: 38 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 217
+ EFVG+ +K+ SENF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK
Sbjct: 1 MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59
Query: 218 TTEMKFKPGEEFERT 262
T + FK G+EF+ T
Sbjct: 60 NTTLSFKLGQEFDET 74
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 74.5 bits (175), Expect = 5e-14
Identities = 34/73 (46%), Positives = 52/73 (71%)
Frame = +2
Query: 47 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 226
EF+G+ +K+ SENF+E++K IGVGL+ RKAA+ +PT+E++ DGD ++ STFK +
Sbjct: 6 EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64
Query: 227 MKFKPGEEFERTA 265
+ FK E+F A
Sbjct: 65 LAFKIREKFVEIA 77
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/72 (44%), Positives = 54/72 (75%)
Frame = +2
Query: 47 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 226
+FVG+ +K+ SENF++++K +GVGL+ RKAA A PT+E++ +G+++++ STFK T
Sbjct: 5 QFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTT 63
Query: 227 MKFKPGEEFERT 262
++F G EF+ T
Sbjct: 64 LEFTLGVEFDET 75
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 61.3 bits (142), Expect = 5e-10
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 38 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 217
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 3 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 61
Query: 218 TTEMKFKPG-EEFERTA 265
+K+K G E+TA
Sbjct: 62 NYTLKWKLGTASDEKTA 78
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 256 EDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 432
E ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 75 EKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 61.3 bits (142), Expect = 5e-10
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 38 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 217
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 18 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 76
Query: 218 TTEMKFKPG-EEFERTA 265
+K+K G E+TA
Sbjct: 77 NYTLKWKLGTASDEKTA 93
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 256 EDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 432
E ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 90 EKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 149
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +2
Query: 35 SIKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSS 208
S+ +F G+ Y++ SENFDEF+ + GV R+ +T + ++ +YN+ +
Sbjct: 2 SVPDKFFGR-YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLT 60
Query: 209 TFKTTEMK-FKPGEEFERTAL 268
+ K T + ++ G++FE L
Sbjct: 61 SKKNTNYQAWELGKKFEAPGL 81
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 77 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 241
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 77 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 241
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 77 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 241
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 32.3 bits (70), Expect = 0.24
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 38 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 211
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 8 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 66
Query: 212 FKTTEMK-FKPGEEFERTAL 268
K T ++ G+ FE L
Sbjct: 67 KKNTLYHGWELGKTFEAEGL 86
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.24
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 38 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 211
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 23 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 81
Query: 212 FKTTEMK-FKPGEEFERTAL 268
K T ++ G+ FE L
Sbjct: 82 KKNTLYHGWELGKTFEAEGL 101
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 30.7 bits (66), Expect = 0.74
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -1
Query: 285 FHLSTVSAVLSNSSPGLNFISVVLKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMV 106
F+L+ + + PGL F S++ K VT S +L SST + +A+ I PT +
Sbjct: 829 FNLNKTNTT-ETAKPGL-FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSL 886
Query: 105 FMNSS 91
F NSS
Sbjct: 887 FGNSS 891
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 65 YKMTSSENFDEFMKTIGVGLITRKAANAVT 154
+ + SENFDE++ G G TRK T
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 59
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 65 YKMTSSENFDEFMKTIGVGLITRKAANAVT 154
+ + SENFDE++ G G TRK T
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFAT 57
>AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical
protein F16B4.11 protein.
Length = 440
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 110 IGVGLITRKAANAVTPTVELRKDGDEYNL 196
+ + L+ KA N + V +RKDGD NL
Sbjct: 166 VDISLLVDKATNYILNPVLIRKDGDMSNL 194
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 452 LRGREXVPPIHEHPAAQLCYLASILYISP 538
LR R+ V P ++ LC A LYISP
Sbjct: 914 LRERQVVLPTVKNVVVDLCMTAQTLYISP 942
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 452 LRGREXVPPIHEHPAAQLCYLASILYISP 538
LR R+ V P ++ LC A LYISP
Sbjct: 914 LRERQVVLPTVKNVVVDLCMTAQTLYISP 942
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 131 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFE 256
+ A + TP D+ + T++T TTE K KP E+ E
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKME 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,887,066
Number of Sequences: 27780
Number of extensions: 231122
Number of successful extensions: 685
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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