Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0318
(549 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 212 1e-55
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 207 5e-54
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 202 1e-52
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 89 2e-18
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 89 2e-18
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 4e-18
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 88 4e-18
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 87 9e-18
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 86 2e-17
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 83 2e-16
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 77 1e-14
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 63 1e-10
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 52 4e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 49 3e-06
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 47 9e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 34 0.088
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 31 0.47
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 30 1.4
SB_55694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 29 2.5
SB_35149| Best HMM Match : DUF1172 (HMM E-Value=0.19) 28 4.4
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_5003| Best HMM Match : FMN_dh (HMM E-Value=0.00057) 27 7.6
SB_25163| Best HMM Match : FMN_dh (HMM E-Value=0.00057) 27 7.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 212 bits (518), Expect = 1e-55
Identities = 101/143 (70%), Positives = 105/143 (73%)
Frame = +3
Query: 39 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 218
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 219 NEASGGKYVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAE 398
NEA+GGKYVPRA P GAGNNWAKGHYTEGAE
Sbjct: 265 NEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 324
Query: 399 LXDSVLDIVRKEAESCDCLQGFQ 467
L DSVLD+VRKEAESCDCLQGFQ
Sbjct: 325 LVDSVLDVVRKEAESCDCLQGFQ 347
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 350 HSLGGGTGSGMGTLLISKIREEYPDR 375
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 207 bits (505), Expect = 5e-54
Identities = 97/134 (72%), Positives = 100/134 (74%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIV 425
PRA P GAGNNWAKGHYTEGAEL DSVLD+V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 426 RKEAESCDCLQGFQ 467
RKEAESCDCLQGFQ
Sbjct: 121 RKEAESCDCLQGFQ 134
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDR 162
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 202 bits (494), Expect = 1e-52
Identities = 94/134 (70%), Positives = 100/134 (74%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIV 425
PR+ P GAGNNWAKGHYTEGAEL DSVLD+V
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 426 RKEAESCDCLQGFQ 467
RKEAESCDC+QGFQ
Sbjct: 121 RKEAESCDCIQGFQ 134
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDR 162
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 136 bits (329), Expect = 1e-32
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 PRA 254
PRA
Sbjct: 61 PRA 63
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/44 (72%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +2
Query: 248 PR-LLVDLEPGTMDSVRSGPFGQIFRPDNFVFXTVRRRQQLGQG 376
PR +LVDLEPGTMDSVRSGPFGQIFRPDNFVF R+ + +G
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFECFAIRKGIFRG 104
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/78 (56%), Positives = 46/78 (58%)
Frame = +3
Query: 234 GKYVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSV 413
GKYVPRA P GAGNNWAKGHYTEGAEL DSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 414 LDIVRKEAESCDCLQGFQ 467
LD+VRKEAESCDC+QGFQ
Sbjct: 62 LDVVRKEAESCDCIQGFQ 79
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1
Query: 511 LLISKIREEYPDR 549
LLI KIREEYPDR
Sbjct: 95 LLILKIREEYPDR 107
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 89.0 bits (211), Expect = 2e-18
Identities = 50/135 (37%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 420 IVRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 121 RIRKLADQCTGLQGF 135
Score = 87.0 bits (206), Expect = 9e-18
Identities = 49/134 (36%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 243 VPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
VPRA P A NN+A+GHYT G E+ D VLD
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 423 VRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 555 IRKLADQCTGLQGF 568
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 88.2 bits (209), Expect = 4e-18
Identities = 48/135 (35%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D+VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 420 IVRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 121 RLRKLADGCTGLQGF 135
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 88.2 bits (209), Expect = 4e-18
Identities = 50/135 (37%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G EL D VLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 420 IVRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 706 RIRKLADQCTGLQGF 720
Score = 86.2 bits (204), Expect = 2e-17
Identities = 48/134 (35%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 242
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 243 VPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
VPRA P A NN+A+GHYT G E+ D VLD
Sbjct: 126 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 185
Query: 423 VRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 186 IRKLADQCTGLQGF 199
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 243 VPRA 254
VPRA
Sbjct: 574 VPRA 577
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 87.0 bits (206), Expect = 9e-18
Identities = 49/134 (36%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 243 VPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
VPRA P A NN+A+GHYT G E+ D VLD
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 423 VRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 121 IRKLADQCTGLQGF 134
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 86.6 bits (205), Expect = 1e-17
Identities = 47/134 (35%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 242
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 243 VPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
VPRA + P A NN+A+GHYT G E+ D VLD
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 423 VRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 926 IRKLADQCTGLQGF 939
Score = 83.4 bits (197), Expect = 1e-16
Identities = 49/134 (36%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 242
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 243 VPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
VPRA P A NN+A+GHYT G E D VLD
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 423 VRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 493 LRKLADGCTGLQGF 506
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 85.8 bits (203), Expect = 2e-17
Identities = 49/135 (36%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D VLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 420 IVRKEAESCDCLQGF 464
RK A+ C LQGF
Sbjct: 121 RCRKLADQCTGLQGF 135
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 85.0 bits (201), Expect = 4e-17
Identities = 48/134 (35%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKY 242
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 243 VPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
VPRA P+ A NN+A+GHYT G + D+VLD
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 423 VRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 540 IRKLADQCSGLQGF 553
Score = 69.7 bits (163), Expect = 1e-12
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Frame = +3
Query: 111 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRASSSTWSPAPW 284
+G WE+ EHGI P G D + + N +++E GK+VPRA P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 285 TLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIVRKEAESCDCLQGF 464
A NN+A+GHYT G +L + VLD +RK A+ C LQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 82.6 bits (195), Expect = 2e-16
Identities = 52/135 (38%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P T+ AL A NN+A+GHYT G + D VLD
Sbjct: 61 HVPRAVFVDLEP---TVVALS-------PEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 420 IVRKEAESCDCLQGF 464
+RK A+ C LQGF
Sbjct: 111 RLRKLADQCSGLQGF 125
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/80 (43%), Positives = 45/80 (56%)
Frame = +3
Query: 228 SGGKYVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXD 407
+GG+YVPR+ P GA NNWAKGHY+EGAEL D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 408 SVLDIVRKEAESCDCLQGFQ 467
++ D++RKEAE+CDC+QG Q
Sbjct: 71 NIFDVLRKEAENCDCMQGVQ 90
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +1
Query: 511 LLISKIREEYPDR 549
L++SKIREEYPDR
Sbjct: 106 LILSKIREEYPDR 118
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3
Query: 354 AGNNWAKGHYTEGAELXDSVLDIVRKEAESCDCLQGFQ 467
A NNWAKG YTEGAEL DS +D +RK AE+CD +QGFQ
Sbjct: 5 AANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LL+SKIREEYPDR
Sbjct: 45 HSLGGGTGSGLGSLLLSKIREEYPDR 70
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 239
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 240 YVPRA 254
+VPRA
Sbjct: 61 HVPRA 65
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = +3
Query: 219 NEASGGKYVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAE 398
+EA+ GKYVPRA P + A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 399 LXDSVLDIVRKEAESCDCLQGF 464
+ + V+D +RK + C LQGF
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGF 1046
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 54.0 bits (124), Expect = 8e-08
Identities = 30/89 (33%), Positives = 38/89 (42%)
Frame = +3
Query: 198 ERINVYYNEASGGKYVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKG 377
+ N ++ E GK+VPRA P A NN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 378 HYTEGAELXDSVLDIVRKEAESCDCLQGF 464
HYT G E D LD +RK A+ C LQGF
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGF 100
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 51.6 bits (118), Expect = 4e-07
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3
Query: 354 AGNNWAKGHYTEGAELXDSVLDIVRKEAESCDCLQGF 464
A NN+A+GHYT G EL D VLD +RK A+ C LQGF
Sbjct: 36 AANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 51.6 bits (118), Expect = 4e-07
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3
Query: 354 AGNNWAKGHYTEGAELXDSVLDIVRKEAESCDCLQGF 464
A NN+A+GHYT G EL D VLD +RK A+ C LQGF
Sbjct: 24 AANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 351 GAGNNWAKGHYTEGAELXDSVLDIVRKEAESCDCLQGF 464
G+GNNWA G G + D VLD+V++E E CD L GF
Sbjct: 104 GSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDE 146
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +3
Query: 354 AGNNWAKGHYTEGAELXDSVLDIVRKEAESCDCLQGF 464
A NN+A+GHYT G E D LD +RK A+ C LQGF
Sbjct: 24 AANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 233
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 234 GKYVPRAS 257
GK+ + +
Sbjct: 254 GKHADQCT 261
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 123 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 224
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 354 AGNNWAKGHYTEGAELXDSVLDIVRK 431
A NN+A+GHYT G EL D VLD +RK
Sbjct: 24 AANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 33.9 bits (74), Expect = 0.088
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 354 AGNNWAKGHYTEGAELXDSVLDIVRK 431
A NN+A+GHYT G E D L+ +RK
Sbjct: 24 AANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = +3
Query: 351 GAGNNWAKGHYTE-----GAELXDSVLDIVRKEAESCDCLQG 461
G GNN+A G++ G L +D +RKE E CD G
Sbjct: 75 GRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAG 116
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 423 VRKEAESCDCLQGFQ 467
+RKEAE CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_55694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -2
Query: 353 AGLFXRRSCPDGRSVRKVQSVQSPWCRAPSRRGGAGHVLAAGGF---IVVYIDALQ 195
A F ++S +S R + + +P P+ GG GHV A GG+ +V+IDA Q
Sbjct: 4 AFFFPQKSTKLAKSSRFKKIILNPDLPVPTN-GGKGHVEAIGGYYHIALVWIDATQ 58
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 442 DSASFRTMSKTESXSSAPSV*CPLAQL 362
DSASFR S + + SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_35149| Best HMM Match : DUF1172 (HMM E-Value=0.19)
Length = 1150
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -3
Query: 370 AQLLPAPDCSEDEVVRTEDLSERSRAYRVH---GAGLQVDEEA 251
A+ P PD ++ ++VRT + +SRA +H GA + +EA
Sbjct: 779 ARQKPHPDTNQAQLVRTTPFNTQSRAVTIHEATGARITTAQEA 821
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 221 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 120
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
>SB_5003| Best HMM Match : FMN_dh (HMM E-Value=0.00057)
Length = 144
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 352 PDCSED-EVVRTEDLSERSRAYRVHGAG 272
P C +D E + ++L+ERS AY V GAG
Sbjct: 5 PVCLDDIEALAEKNLNERSYAYFVSGAG 32
>SB_25163| Best HMM Match : FMN_dh (HMM E-Value=0.00057)
Length = 183
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 352 PDCSED-EVVRTEDLSERSRAYRVHGAG 272
P C +D E + ++L+ERS AY V GAG
Sbjct: 44 PVCLDDIEALAEKNLNERSYAYFVSGAG 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,373,772
Number of Sequences: 59808
Number of extensions: 385747
Number of successful extensions: 1160
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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