Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0318
(549 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 192 1e-49
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 190 5e-49
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 190 5e-49
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 190 5e-49
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 188 2e-48
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 187 4e-48
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 186 1e-47
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 185 2e-47
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 184 3e-47
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 91 4e-19
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 91 4e-19
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 90 8e-19
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 88 4e-18
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 88 4e-18
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 85 2e-17
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 85 2e-17
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 80 1e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 79 3e-15
At5g53905.1 68418.m06707 expressed protein 33 0.095
At4g37190.1 68417.m05265 expressed protein 31 0.67
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 30 1.2
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 1.5
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 1.5
At1g19490.1 68414.m02428 bZIP transcription factor family protei... 29 2.0
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 29 2.7
At4g29990.1 68417.m04266 light repressible receptor protein kina... 28 4.7
At5g36950.1 68418.m04431 DegP protease, putative contains simila... 27 6.2
At3g12560.1 68416.m01563 telomeric DNA-binding protein, putative... 27 6.2
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 6.2
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 8.3
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 192 bits (469), Expect = 1e-49
Identities = 89/135 (65%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 242
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 243 VPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
VPRA P GAGNNWAKGHYTEGAEL D+VLD+
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 423 VRKEAESCDCLQGFQ 467
VRKEAE+CDCLQGFQ
Sbjct: 121 VRKEAENCDCLQGFQ 135
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 138 HSLGGGTGSGMGTLLISKIREEYPDR 163
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 190 bits (463), Expect = 5e-49
Identities = 89/134 (66%), Positives = 96/134 (71%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 246 PRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIV 425
PRA P GAGNNWAKGHYTEGAEL DSVLD+V
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQ 467
RKEAE+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDR 162
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 190 bits (463), Expect = 5e-49
Identities = 89/134 (66%), Positives = 96/134 (71%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 246 PRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIV 425
PRA P GAGNNWAKGHYTEGAEL DSVLD+V
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQ 467
RKEAE+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDR 162
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 190 bits (463), Expect = 5e-49
Identities = 87/134 (64%), Positives = 97/134 (72%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 246 PRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIV 425
PRA P GAGNNWAKGHYTEGAEL D+VLD+V
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 426 RKEAESCDCLQGFQ 467
RKEAE+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDR 162
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 188 bits (458), Expect = 2e-48
Identities = 89/135 (65%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 242
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 243 VPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
VPRA P GAGNNWAKGHYTEGAEL D+VLD+
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 423 VRKEAESCDCLQGFQ 467
VRKEAE+CDCLQGFQ
Sbjct: 121 VRKEAENCDCLQGFQ 135
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 138 HSLGGGTGSGMGTLLISKIREEYPDR 163
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 187 bits (456), Expect = 4e-48
Identities = 89/134 (66%), Positives = 95/134 (70%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 246 PRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIV 425
PRA P GAGNNWAKGHYTEGAEL DSVLD+V
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQ 467
RKEAE+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDR 162
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 186 bits (452), Expect = 1e-47
Identities = 89/134 (66%), Positives = 95/134 (70%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 246 PRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIV 425
PRA P GAGNNWAKGHYTEGAEL DSVLD+V
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQ 467
RKEAE+ DCLQGFQ
Sbjct: 121 RKEAENSDCLQGFQ 134
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDR 162
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 185 bits (450), Expect = 2e-47
Identities = 86/134 (64%), Positives = 96/134 (71%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 246 PRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIV 425
PRA P GAGNNWAKGHYTEGAEL DSVLD+V
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQ 467
RKEAE+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDR 162
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 184 bits (449), Expect = 3e-47
Identities = 85/134 (63%), Positives = 95/134 (70%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 245
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 246 PRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDIV 425
PRA P GAGNNWAKGHYTEGAEL DSVLD+V
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQ 467
RKEAE+CDCLQGFQ
Sbjct: 121 RKEAENCDCLQGFQ 134
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 472 HTRSAAAXVPVSDLLISKIREEYPDR 549
H+ + LLISKIREEYPDR
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDR 162
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 91.1 bits (216), Expect = 4e-19
Identities = 50/135 (37%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 420 IVRKEAESCDCLQGF 464
VRK A++C LQGF
Sbjct: 121 RVRKLADNCTGLQGF 135
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 91.1 bits (216), Expect = 4e-19
Identities = 50/135 (37%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 420 IVRKEAESCDCLQGF 464
VRK A++C LQGF
Sbjct: 121 RVRKLADNCTGLQGF 135
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 90.2 bits (214), Expect = 8e-19
Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 420 IVRKEAESCDCLQGF 464
+RK A++C LQGF
Sbjct: 121 RLRKLADNCTGLQGF 135
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 87.8 bits (208), Expect = 4e-18
Identities = 49/135 (36%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 420 IVRKEAESCDCLQGF 464
+RK A++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 87.8 bits (208), Expect = 4e-18
Identities = 49/135 (36%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 420 IVRKEAESCDCLQGF 464
+RK A++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 85.4 bits (202), Expect = 2e-17
Identities = 48/135 (35%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 420 IVRKEAESCDCLQGF 464
+RK A++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 85.4 bits (202), Expect = 2e-17
Identities = 48/135 (35%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 239
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 YVPRASSSTWSPAPWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLD 419
+VPRA P A NN+A+GHYT G E+ D LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 420 IVRKEAESCDCLQGF 464
+RK A++C LQGF
Sbjct: 121 RIRKLADNCTGLQGF 135
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 79.8 bits (188), Expect = 1e-15
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 248
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 249 RASSSTWSPAPWT-LYALDL-XXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
RA P + D GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 423 VRKEAESCDCLQGF 464
+ +EA+ D L+GF
Sbjct: 122 IDREADGSDSLEGF 135
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 78.6 bits (185), Expect = 3e-15
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 248
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 249 RASSSTWSP--APWTLYALDLXXXXXXXXXXXXXXXGAGNNWAKGHYTEGAELXDSVLDI 422
RA P GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 423 VRKEAESCDCLQGF 464
+ +EA+ D L+GF
Sbjct: 122 IDREADGSDSLEGF 135
>At5g53905.1 68418.m06707 expressed protein
Length = 168
Score = 33.5 bits (73), Expect = 0.095
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -3
Query: 400 SSAPSV*CPLAQLLPAPDCSEDEVVRTEDLSERSRAYRVHGAGLQ 266
SSAP+ P ++PAPD SED+ R S SR VH GL+
Sbjct: 88 SSAPAHTTPQLPVIPAPDASEDDRSRQ---SRSSRTVMVHQPGLR 129
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 0.67
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 155
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = -2
Query: 269 PSRRGGAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL 96
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S D VA L
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
Query: 95 ------TSLDMYDFPHFVL 57
+ +YD H VL
Sbjct: 64 LKSAKIRNTRIYDADHSVL 82
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 474 VSVGIPGGNHTIPLPFERCLKLNRRAQHPPCSVPWPSC 361
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 420 IVRKEAESCDCLQGF 464
+VRKEAE+C+CLQ F
Sbjct: 7 VVRKEAENCNCLQVF 21
>At1g19490.1 68414.m02428 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 471
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -3
Query: 427 RTMSKTESXSSAPSV*CPLAQLLPAPDCSEDEVVRTEDLSERSRAYRVHGAGLQVDEEAR 248
R KTES S + P + LP PD +E+ +V+ E+ E V E
Sbjct: 65 RKRVKTESPPSDSLLKPPDSDTLPTPDLAEERLVKEEEEEEEVEPITKELTKAPVKSEIN 124
Query: 247 G-TYLPPEASL*YTLMRSN 194
G T P AS RSN
Sbjct: 125 GETPKPILASTLIRCSRSN 143
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 28.7 bits (61), Expect = 2.7
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = -2
Query: 236 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
Query: 56 FM*TINYLTLKICP 15
+ TL I P
Sbjct: 195 INGRGSGATLNIEP 208
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 286 LCTLWTFRTDLPSGQLRLXNSPAPATTGPRDTTRR--VLSSXIQF*TSFER 432
L +W F+ G + N P TGP DT +R + S + +FER
Sbjct: 530 LALIWHFKKRSRRGTIS--NKPLGVNTGPLDTAKRYFIYSEVVNITNNFER 578
>At5g36950.1 68418.m04431 DegP protease, putative contains
similarity to DegP2 protease GI:13172275 from
[Arabidopsis thaliana]
Length = 586
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -1
Query: 537 LFSDFGDEEVTYRNXCRRR-ASVSVGIPGGNHTIPLPFERCLKLNRRAQHPPCSVPWPSC 361
L S V R RRR A S+ I + L + +K+ + P +PW +
Sbjct: 75 LSSPVSSRRVNNRKISRRRKAGKSLSISPAADAVDLALDSVVKIFTVSTSPSYFLPWQNK 134
Query: 360 CRRRTVXK-TKLSGRKI 313
+R ++ +SGRKI
Sbjct: 135 SQRESMGSGFVISGRKI 151
>At3g12560.1 68416.m01563 telomeric DNA-binding protein, putative
similar to telomeric DNA-binding protein 1 [Arabidopsis
thaliana] gi|13641340|gb|AAK31590
Length = 619
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -3
Query: 376 PLAQLLPAPDCSEDEVVRTE--DLSERSRAYRVHGAGL 269
P +P P CSED V T+ LSERS A + +G+
Sbjct: 403 PSPSKVPLPLCSEDPAVPTDPTSLSERSAASPMLDSGI 440
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 72 EIVHIQAGQCGNQIGAKFWEIISD 143
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 87 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 179
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,166,205
Number of Sequences: 28952
Number of extensions: 268847
Number of successful extensions: 875
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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