Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0316
         (329 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p pro...    29   1.1  
AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA...    29   1.1  
M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth f...    28   3.3  
K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental ...    28   3.3  
AL035436-2|CAB37610.1| 2704|Drosophila melanogaster EG:140G11.1,...    28   3.3  
AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA ...    28   3.3  

>AY118487-1|AAM49856.1|  870|Drosophila melanogaster LD01372p
           protein.
          Length = 870

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +1

Query: 169 LSGNSGRKHSRCFTSILREFTGRQH 243
           LSG+S   HSR +T++LR+ + +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212


>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
           protein.
          Length = 2139

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +1

Query: 169 LSGNSGRKHSRCFTSILREFTGRQH 243
           LSG+S   HSR +T++LR+ + +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212


>M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth
           factor protein.
          Length = 2703

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 243 LCHXDCCCQGSP-HAIR*C*TSPVHPS 320
           LCH D  C  +P HA   C TSP++ S
Sbjct: 406 LCHLDDACTSNPCHADAICDTSPINGS 432


>K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental
           protein protein.
          Length = 2703

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 243 LCHXDCCCQGSP-HAIR*C*TSPVHPS 320
           LCH D  C  +P HA   C TSP++ S
Sbjct: 406 LCHLDDACTSNPCHADAICDTSPINGS 432


>AL035436-2|CAB37610.1| 2704|Drosophila melanogaster
           EG:140G11.1,FBgn0004647;N protein.
          Length = 2704

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 243 LCHXDCCCQGSP-HAIR*C*TSPVHPS 320
           LCH D  C  +P HA   C TSP++ S
Sbjct: 406 LCHLDDACTSNPCHADAICDTSPINGS 432


>AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA
           protein.
          Length = 2703

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 243 LCHXDCCCQGSP-HAIR*C*TSPVHPS 320
           LCH D  C  +P HA   C TSP++ S
Sbjct: 406 LCHLDDACTSNPCHADAICDTSPINGS 432


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,796,912
Number of Sequences: 53049
Number of extensions: 212935
Number of successful extensions: 275
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)