Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0315
         (557 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0393 - 22581651-22582046,22582191-22582196                       30   1.4  
08_01_0511 + 4459685-4459755,4461553-4463653,4463741-4463808,446...    27   7.7  
02_04_0413 + 22681957-22682035,22682253-22682788                       23   9.4  

>02_04_0393 - 22581651-22582046,22582191-22582196
          Length = 133

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 322 EVVFFKHFSGFWHEGGVG*HRMGY 251
           E+V++ H  G++H GGV  H  GY
Sbjct: 90  ELVYYHHGYGYYHPGGVYHHHPGY 113


>08_01_0511 +
           4459685-4459755,4461553-4463653,4463741-4463808,
           4465156-4465282,4465379-4465429
          Length = 805

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 499 VSLSFFRIFASLDFFFKNFSTAATLLGFDALFDFPQLEHL 380
           + +S +  F  L +FF + +   TLL F+     P+L+HL
Sbjct: 560 IFISSYNAFRCLKYFFLHINMCGTLLEFEE-GSMPKLQHL 598


>02_04_0413 + 22681957-22682035,22682253-22682788
          Length = 204

 Score = 23.4 bits (48), Expect(2) = 9.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 211 SPIAHPPCTPSAS 249
           SP  HPPC  SA+
Sbjct: 100 SPCVHPPCCESAA 112



 Score = 22.2 bits (45), Expect(2) = 9.4
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +1

Query: 223 HPPCTPSASC 252
           HPPC P   C
Sbjct: 139 HPPCKPGCCC 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,301,311
Number of Sequences: 37544
Number of extensions: 255317
Number of successful extensions: 774
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)