Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0315
         (557 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA...    29   4.3  
X71974-1|CAA50794.1|  196|Drosophila melanogaster GCR 17 protein.      28   7.4  

>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
            protein.
          Length = 5106

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 418  FDALFDFPQLEHLAFDLVDIMDTAL 344
            FD LF+  Q EHL F L  ++ TA+
Sbjct: 1174 FDVLFEAQQFEHLGFTLPAVLRTAI 1198


>X71974-1|CAA50794.1|  196|Drosophila melanogaster GCR 17 protein.
          Length = 196

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 270 GDTVWGT*CRRRTWWMRNWRH 208
           G + W    RRR +W R WRH
Sbjct: 23  GRSSWRRRWRRRLYWRRRWRH 43


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,355,960
Number of Sequences: 53049
Number of extensions: 443272
Number of successful extensions: 1392
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)