Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0315
         (557 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g36010.1 68417.m05127 pathogenesis-related thaumatin family p...    29   2.8  
At5g03230.1 68418.m00271 expressed protein contains Pfam profile...    28   4.9  
At4g25220.1 68417.m03629 transporter, putative similar to glycer...    28   4.9  
At1g78740.1 68414.m09177 hypothetical protein                          27   6.4  
At5g66490.1 68418.m08384 expressed protein                             27   8.5  
At1g73270.1 68414.m08479 serine carboxypeptidase S10 family prot...    27   8.5  

>At4g36010.1 68417.m05127 pathogenesis-related thaumatin family
           protein similar to receptor serine/threonine kinase PR5K
           [Arabidopsis thaliana] GI:1235680; contains Pfam profile
           PF00314: Thaumatin family
          Length = 301

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -1

Query: 269 VTPYGVHDADGVHGGCAIGDIIAAFNNTCSCYVSVS 162
           + P G  DA GV G C     +A  N  C   + V+
Sbjct: 141 IVPQGGGDAGGVAGNCTTTGCVAELNGPCPAQLKVA 176


>At5g03230.1 68418.m00271 expressed protein contains Pfam profile
           PF04520: Protein of unknown function, DUF584
          Length = 166

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 54  KKNDRGKETIVTIHDLP*NLYLWCKILKSAEYLG 155
           K  D G   I     LP N+  W KILKS EY G
Sbjct: 64  KTGDSGNREITKTGSLPVNIPDWSKILKS-EYRG 96


>At4g25220.1 68417.m03629 transporter, putative similar to
           glycerol-3-phosphate transporter (glycerol 3-phosphate
           permease) [Homo sapiens] GI:7543982
          Length = 504

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 331 FDLVGVLYP*CQQGQKPNVLVAGNRKAHRIRGAWRP 438
           F L  V Y      +KPN +V G   A  I G W P
Sbjct: 41  FILTFVAYIAFHAARKPNSIVKGTLSASTIEGGWAP 76


>At1g78740.1 68414.m09177 hypothetical protein
          Length = 306

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 204 NNVANCASTMYAVCIMYP-IRCHPTPPSCQNPEKCLKKTTSKGVRPCR 344
           ++V N   +   + I+Y  +RC P PP       C+  +T+ G++ C+
Sbjct: 251 SSVKNMTISSIILKIIYDYLRCEPLPPHSVIYISCMLSSTTTGLKCCQ 298


>At5g66490.1 68418.m08384 expressed protein
          Length = 109

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 370 GQKPNVLVAGNRKAHRIRGAWRPLKSF*KRNLKRQRCEK 486
           GQ P V    N+   + RG+  PL SF + +LKR++ +K
Sbjct: 41  GQSPKV----NKPVEKTRGSAHPLFSFFEMSLKRKKKKK 75


>At1g73270.1 68414.m08479 serine carboxypeptidase S10 family protein
           similar to serine carboxypeptidase I precursor
           (SP:P07519) [Hordeum vulgare], glucose acyltransferase
           GB:AAD01263 [Solanum berthaultii]; contains Pfam
           profile: PF00450 Serine carboxypeptidase;
          Length = 441

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +3

Query: 183 TSIIKRCNNVANCASTMYAVCIMYPIRCHPTPPSC 287
           T  +K       C S +Y   I+YP+ C  T P C
Sbjct: 264 TECLKLLEEFNECTSKLYRSHILYPL-CEMTNPDC 297


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,878,121
Number of Sequences: 28952
Number of extensions: 208357
Number of successful extensions: 496
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)