Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0314
         (427 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4STK8 Cluster: Chromosome undetermined SCAF14158, whol...    32   4.3  
UniRef50_Q4RMX7 Cluster: Chromosome 3 SCAF15018, whole genome sh...    32   4.3  
UniRef50_Q9PWP0 Cluster: Cytochrome P450; n=2; Dicentrarchus lab...    31   7.5  
UniRef50_UPI0000498FCA Cluster: hypothetical protein 75.t00022; ...    31   9.9  

>UniRef50_Q4STK8 Cluster: Chromosome undetermined SCAF14158, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14158, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 612

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +1

Query: 157 SPTLXHTSPSXICFSI*NLAKTDKYIAELRDEYKKCVLGR 276
           SPT   T+ S IC+S+ NLA+ D Y  + R E    + GR
Sbjct: 402 SPTGHDTTASAICWSLYNLARHDHYQEKCRKEVMDLMEGR 441


>UniRef50_Q4RMX7 Cluster: Chromosome 3 SCAF15018, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 3 SCAF15018, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 592

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +1

Query: 157 SPTLXHTSPSXICFSI*NLAKTDKYIAELRDEYKKCVLGR 276
           SPT   T+ S IC+S+ NLA+ D Y  + R E    + GR
Sbjct: 359 SPTGHDTTASAICWSLYNLARHDHYQEKCRKEVMDLMEGR 398


>UniRef50_Q9PWP0 Cluster: Cytochrome P450; n=2; Dicentrarchus
           labrax|Rep: Cytochrome P450 - Dicentrarchus labrax
           (European sea bass)
          Length = 526

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +1

Query: 175 TSPSXICFSI*NLAKTDKYIAELRDEYKKCVLGRR*PQIQLLNLKN 312
           T+ S IC+++ NLA+ D+Y  + R E  + + GR   +I+  +L N
Sbjct: 331 TTASAICWTLYNLARHDQYQEKCRQEVMELMEGRDRHEIEWEDLSN 376


>UniRef50_UPI0000498FCA Cluster: hypothetical protein 75.t00022;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 75.t00022 - Entamoeba histolytica HM-1:IMSS
          Length = 1687

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = -1

Query: 253 IRHVILRYIY--LFWPNSKLKSKXWTEKCEXMSVTIL 149
           IR++ILR+I+   +WPN  L+ +   E  E MS T+L
Sbjct: 433 IRNIILRHIFDIRWWPNDSLRVEYIKELQESMSHTVL 469


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,366,593
Number of Sequences: 1657284
Number of extensions: 5134208
Number of successful extensions: 10297
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10295
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)