Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0314
         (427 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81065-1|CAB02968.1|  399|Caenorhabditis elegans Hypothetical pr...    30   0.80 
AF024499-5|AAB70355.1|  359|Caenorhabditis elegans Hypothetical ...    28   2.4  
Z78065-5|CAB01515.1|  954|Caenorhabditis elegans Hypothetical pr...    27   4.3  
U58749-8|AAK18873.1|  297|Caenorhabditis elegans Hypothetical pr...    27   4.3  
U51999-4|AAA96085.2|  627|Caenorhabditis elegans Hypothetical pr...    26   9.8  
AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical...    26   9.8  
AC024759-1|AAK73907.1|  376|Caenorhabditis elegans Hypothetical ...    26   9.8  

>Z81065-1|CAB02968.1|  399|Caenorhabditis elegans Hypothetical
           protein F16C3.1 protein.
          Length = 399

 Score = 29.9 bits (64), Expect = 0.80
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -1

Query: 262 IFYIRHVILRYIYLFW-PNSKLKSK 191
           I+Y+ H +L Y+Y+FW P  K + K
Sbjct: 344 IYYLHHAVLFYMYIFWSPQMKKQLK 368


>AF024499-5|AAB70355.1|  359|Caenorhabditis elegans Hypothetical
           protein F42G2.3 protein.
          Length = 359

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 311 FFKFSNWICGQRLPNTHFLYSSRNSAIYLSVLAKF*IEKQIXDG 180
           F  F +W+   R   THF ++ RN    + VL K  I   + +G
Sbjct: 279 FRLFEDWMEHGREVGTHFSFAMRNEGNIIDVLDKIRINYNVEEG 322


>Z78065-5|CAB01515.1|  954|Caenorhabditis elegans Hypothetical
           protein T09E8.2 protein.
          Length = 954

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 264 RVREALTTNPVTKFKKFLIKTISSCLRSVCREKPTRH 374
           R + A +  PV +  KF +K IS   R   R KPTR+
Sbjct: 550 RTKWANSLFPVKEGNKFQLKKISWLRRRFLRSKPTRY 586


>U58749-8|AAK18873.1|  297|Caenorhabditis elegans Hypothetical
           protein B0496.1 protein.
          Length = 297

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 294 VTKFKKFLIKTISSCLRSVCREKPTRHHSTSADIFKPLMN 413
           +TK+++FLIKT   C RS  ++         A + + ++N
Sbjct: 219 ITKYEQFLIKTRCHCQRSSIQDVKLAEKFKMASLLEEIIN 258


>U51999-4|AAA96085.2|  627|Caenorhabditis elegans Hypothetical
           protein C43H6.4 protein.
          Length = 627

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 333 SCLRSVCREKPTRHHSTSADIFKPL 407
           +CL +VC +K   H +++ ++FK L
Sbjct: 350 TCLAAVCPKKEQHHQNSNPELFKLL 374


>AL117195-20|CAB60768.1|  388|Caenorhabditis elegans Hypothetical
           protein Y57A10A.27 protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 258 KMRVREALTTNPVTKFK-KFLIKTISSCLRSVCREKPTRHHSTSAD 392
           K +   +   NP+  F  K L+K+I +C+ +  +EK  +  S+  D
Sbjct: 110 KTKTFSSFAVNPIDTFDTKSLLKSIQNCIENPEKEKRWKQLSSKLD 155


>AC024759-1|AAK73907.1|  376|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.3b protein.
          Length = 376

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 297 TKFKKFLIKTISSCLRSVCREKPTRHHSTSADIFKPLMN 413
           T F+K   + ++     V    PT   ST  D  KP+ N
Sbjct: 3   TSFRKRFYRLVACAAGGVVMSAPTTSSSTDEDFAKPVKN 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,810,567
Number of Sequences: 27780
Number of extensions: 132871
Number of successful extensions: 297
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)