Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0312
         (547 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92833-7|CAB07381.1|  825|Caenorhabditis elegans Hypothetical pr...    32   0.23 
Z92833-6|CAB07380.1|  823|Caenorhabditis elegans Hypothetical pr...    32   0.23 
AL023842-9|CAA19521.1|  825|Caenorhabditis elegans Hypothetical ...    32   0.23 
AL023842-8|CAA19520.1|  823|Caenorhabditis elegans Hypothetical ...    32   0.23 
U39646-7|AAA80371.1|  623|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U39646-6|AAK72058.1|  624|Caenorhabditis elegans Hypothetical pr...    29   1.7  
U39646-5|AAK72057.1|  678|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical p...    28   3.8  
U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.       28   5.0  
U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.       28   5.0  
Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    27   8.8  
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AF098997-5|AAC68717.1|  218|Caenorhabditis elegans Insulin relat...    27   8.8  

>Z92833-7|CAB07381.1|  825|Caenorhabditis elegans Hypothetical
           protein F38A6.3b protein.
          Length = 825

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -1

Query: 346 FPANENDYTSLVQTLLMHLRGSLHTAEGVSPVPSNKSCKLHLHQVXLHKRDNKXXXQR 173
           F  + N Y+S V TL+ HL+ + H  E     P++ S KLHL  + +     +   +R
Sbjct: 60  FRKSINSYSSKV-TLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>Z92833-6|CAB07380.1|  823|Caenorhabditis elegans Hypothetical
           protein F38A6.3a protein.
          Length = 823

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -1

Query: 346 FPANENDYTSLVQTLLMHLRGSLHTAEGVSPVPSNKSCKLHLHQVXLHKRDNKXXXQR 173
           F  + N Y+S V TL+ HL+ + H  E     P++ S KLHL  + +     +   +R
Sbjct: 60  FRKSINSYSSKV-TLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>AL023842-9|CAA19521.1|  825|Caenorhabditis elegans Hypothetical
           protein F38A6.3b protein.
          Length = 825

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -1

Query: 346 FPANENDYTSLVQTLLMHLRGSLHTAEGVSPVPSNKSCKLHLHQVXLHKRDNKXXXQR 173
           F  + N Y+S V TL+ HL+ + H  E     P++ S KLHL  + +     +   +R
Sbjct: 60  FRKSINSYSSKV-TLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>AL023842-8|CAA19520.1|  823|Caenorhabditis elegans Hypothetical
           protein F38A6.3a protein.
          Length = 823

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -1

Query: 346 FPANENDYTSLVQTLLMHLRGSLHTAEGVSPVPSNKSCKLHLHQVXLHKRDNKXXXQR 173
           F  + N Y+S V TL+ HL+ + H  E     P++ S KLHL  + +     +   +R
Sbjct: 60  FRKSINSYSSKV-TLIAHLKVARHYGEVAPITPTSASLKLHLFTIKMEDNRKRNMERR 116


>U39646-7|AAA80371.1|  623|Caenorhabditis elegans Hypothetical
           protein F47B7.2a protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 193 CPACVTLLGEGATCKIYSKELAKPPPLCVRSLSNASKEFALSLCSRFH*QENISLQYFYH 372
           C AC+   G   T K ++K+L K  PL   ++ N + +  + LC         SL+YF +
Sbjct: 78  CGACI---GYAPTFKKFAKQLEKWAPLVQVTVVNCADDKNMPLCREHSVSSYPSLRYFKY 134

Query: 373 D 375
           +
Sbjct: 135 N 135


>U39646-6|AAK72058.1|  624|Caenorhabditis elegans Hypothetical
           protein F47B7.2c protein.
          Length = 624

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 193 CPACVTLLGEGATCKIYSKELAKPPPLCVRSLSNASKEFALSLCSRFH*QENISLQYFYH 372
           C AC+   G   T K ++K+L K  PL   ++ N + +  + LC         SL+YF +
Sbjct: 78  CGACI---GYAPTFKKFAKQLEKWAPLVQVTVVNCADDKNMPLCREHSVSSYPSLRYFKY 134

Query: 373 D 375
           +
Sbjct: 135 N 135


>U39646-5|AAK72057.1|  678|Caenorhabditis elegans Hypothetical
           protein F47B7.2b protein.
          Length = 678

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 193 CPACVTLLGEGATCKIYSKELAKPPPLCVRSLSNASKEFALSLCSRFH*QENISLQYFYH 372
           C AC+   G   T K ++K+L K  PL   ++ N + +  + LC         SL+YF +
Sbjct: 78  CGACI---GYAPTFKKFAKQLEKWAPLVQVTVVNCADDKNMPLCREHSVSSYPSLRYFKY 134

Query: 373 D 375
           +
Sbjct: 135 N 135


>Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical
           protein Y41E3.18 protein.
          Length = 510

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +1

Query: 154 TEHRXRHAGXXACCPACVTLLGEGATCKIYSK-ELAKPPP 270
           T HR +H    ACCP C  ++   A      +    KPPP
Sbjct: 149 TWHRVKHVVFVACCPPCCCIIQRSAFWPPRREYYFFKPPP 188


>Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical
           protein C50H2.3 protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 16  KFQNENVDFYNAGGMXCXTAYGALVCGTDYCEKNPCI 126
           K+ +++VD        C   +G   C    CE NPC+
Sbjct: 609 KYNDDDVDEKPTFECFCAAGFGGPKCDQRPCESNPCL 645


>U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 16  KFQNENVDFYNAGGMXCXTAYGALVCGTDYCEKNPCI 126
           K+ +++VD        C   +G   C    CE NPC+
Sbjct: 609 KYNDDDVDEKPTFECFCAAGFGRPKCDQRPCESNPCL 645


>U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 16  KFQNENVDFYNAGGMXCXTAYGALVCGTDYCEKNPCI 126
           K+ +++VD        C   +G   C    CE NPC+
Sbjct: 609 KYNDDDVDEKPTFECFCAAGFGRPKCDQRPCESNPCL 645


>Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical
           protein K05D4.3 protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -1

Query: 391 IXFRTGRDRSIASLYFPANENDYTSLVQTLLMH 293
           + FR+ R R  ++  FP  ++ Y+++V+T ++H
Sbjct: 47  VVFRSNRQRDRSTPIFPIIKHFYSTVVRTYILH 79


>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
           protein F48E3.8a protein.
          Length = 2427

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +1

Query: 64  CXTAYGALVCGTDYCEKNPCIQPPLVCPXNTEHRXRHAGXXACCPACVTLLGEGATCKIY 243
           C    GAL  GT     +  IQ  + CP    +  R AG       C+T+   G  C+ Y
Sbjct: 59  CQCVKGALNTGTTCIASSTAIQTSVACPAGQTY-IREAG------VCMTVQQPGEPCQ-Y 110

Query: 244 SKELA--KPPPLCVR 282
           S++ +  +P   C++
Sbjct: 111 SQQCSALEPGAYCLK 125


>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
           protein F48E3.8b protein.
          Length = 1299

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +1

Query: 64  CXTAYGALVCGTDYCEKNPCIQPPLVCPXNTEHRXRHAGXXACCPACVTLLGEGATCKIY 243
           C    GAL  GT     +  IQ  + CP    +  R AG       C+T+   G  C+ Y
Sbjct: 59  CQCVKGALNTGTTCIASSTAIQTSVACPAGQTY-IREAG------VCMTVQQPGEPCQ-Y 110

Query: 244 SKELA--KPPPLCVR 282
           S++ +  +P   C++
Sbjct: 111 SQQCSALEPGAYCLK 125


>AF098997-5|AAC68717.1|  218|Caenorhabditis elegans Insulin related
           protein 31 protein.
          Length = 218

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +1

Query: 4   KRIQKFQNENVDFYNAGGMXCXTAYGALVCGTDYCEKNPCIQ 129
           KR+    NEN++  N   +       A  C  D+ +KN C Q
Sbjct: 166 KRVNTLCNENINVENNVSVSKSCCESAAGCTDDWIKKNVCTQ 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,710,940
Number of Sequences: 27780
Number of extensions: 220976
Number of successful extensions: 482
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)