Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0308
(313 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical ... 129 3e-31
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 30 0.30
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 29 0.68
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 28 1.2
AL032639-10|CAA21634.1| 108|Caenorhabditis elegans Hypothetical... 26 6.4
Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical pr... 25 8.4
AY594354-1|AAT01444.1| 539|Caenorhabditis elegans cofactor-inde... 25 8.4
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 25 8.4
AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical... 25 8.4
AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical... 25 8.4
>AL110490-2|CAB54440.1| 91|Caenorhabditis elegans Hypothetical
protein Y48B6A.2 protein.
Length = 91
Score = 129 bits (312), Expect = 3e-31
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = +2
Query: 26 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 205
MAKRTKKVGI GKYGTRYGASLRKM KK+EV QH++YTCSFCGK+AMKR GIW+C +C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKC 60
Query: 206 KRTVAGGAXVFSTTAA 253
+ VAGGA V+ T A
Sbjct: 61 HKVVAGGAYVYGTVTA 76
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 4 CIGEVYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNPTRKVYLLILW 153
C + Y+ + +QK +N W+ H +RCL N +N T+ L LW
Sbjct: 410 CGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPN-TSHFANITKIKDALDLW 458
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 29.1 bits (62), Expect = 0.68
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 89 LRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAXVFSTTAAYHADL 268
L+K KKM V A S + M +C G + C+R + G A + T A H D+
Sbjct: 32 LKKSTKKMRVCPVAHCYSSLTAPEPMTSTCEG----ENCQRKIMGNAEILRT--ACHHDI 85
Query: 269 LSGGY 283
Y
Sbjct: 86 CQHCY 90
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 122 QHAKYTCSFCGKDAMKRSCVGIWSCKRC 205
++ KY C+ C R G+WSCK C
Sbjct: 229 ENNKYECAICYTRITTRQ--GVWSCKTC 254
>AL032639-10|CAA21634.1| 108|Caenorhabditis elegans Hypothetical
protein Y38F1A.9 protein.
Length = 108
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 68 GTRYGASLRKMVKKMEVTQHAK 133
G RY + ++KMV K VT H K
Sbjct: 46 GDRYVSKIKKMVGKFTVTLHIK 67
>Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical
protein F35E8.6 protein.
Length = 272
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 155 KDAMKRSCVGIWSCKRCKRTVAGGAXVFSTTAA 253
+D + ++C +CKRC T A A +TTAA
Sbjct: 177 QDFVNKNCQK--TCKRCPATTAAPAAGVTTTAA 207
>AY594354-1|AAT01444.1| 539|Caenorhabditis elegans
cofactor-independent phosphoglyceratemutase protein.
Length = 539
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 95 KMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAXVFSTTAAYHADLL 271
KM++++E H C+F D + + V + K C+ T ++ T + L+
Sbjct: 405 KMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLM 463
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/58 (20%), Positives = 22/58 (37%)
Frame = +2
Query: 137 TCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAXVFSTTAAYHADLLSGGYVK*SNLNNK 310
TC CG++ KR C+ + C + S+ + G+ K N+ +
Sbjct: 1119 TCGSCGQETRKRKCLSLQYGCACTGNATDTSVCASSVCLFPRTSCCTGFKKMVNITGR 1176
>AF039713-12|AAO12419.1| 521|Caenorhabditis elegans Hypothetical
protein F57B10.3b protein.
Length = 521
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 95 KMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAXVFSTTAAYHADLL 271
KM++++E H C+F D + + V + K C+ T ++ T + L+
Sbjct: 387 KMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLM 445
>AF039713-11|AAB96720.1| 539|Caenorhabditis elegans Hypothetical
protein F57B10.3a protein.
Length = 539
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 95 KMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVAGGAXVFSTTAAYHADLL 271
KM++++E H C+F D + + V + K C+ T ++ T + L+
Sbjct: 405 KMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLM 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,732,988
Number of Sequences: 27780
Number of extensions: 158903
Number of successful extensions: 439
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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