Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0300
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457562-1|AAL68792.1|   78|Anopheles gambiae hypothetical prote...    24   2.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   5.0  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   5.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.7  

>AF457562-1|AAL68792.1|   78|Anopheles gambiae hypothetical protein
           15 protein.
          Length = 78

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 155 ANYSSDRKPNLAAYKRGTGGRSSFNG 232
           AN S D+K +   +  GTG R +  G
Sbjct: 42  ANKSKDKKASAPKHSLGTGARMALTG 67


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 294  KNWYPVNFTIQR 329
            +NWYP   T+QR
Sbjct: 1209 RNWYPDKLTVQR 1220


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGSPDLSD 271
           RKP  A  + GT  ++  + I+ T+ G+P+LSD
Sbjct: 50  RKPQ-ANRRSGTVDQNLRSKILKTIKGNPNLSD 81


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 532  WQFFLHHQVNIIVFEILSFHNLVQLD 455
            W F  H +VN  + ++LS H   + D
Sbjct: 928  WHFRRHGEVNFHLSQVLSGHGFFRDD 953


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,436
Number of Sequences: 2352
Number of extensions: 11785
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)