Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0300
(547 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 99 5e-21
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 99 5e-21
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 99 5e-21
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 99 5e-21
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 99 5e-21
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 99 5e-21
BC111532-1|AAI11533.1| 706|Homo sapiens ZNF304 protein protein. 29 8.0
BC111531-1|AAI11532.1| 617|Homo sapiens ZNF304 protein protein. 29 8.0
AJ276316-1|CAC06610.1| 659|Homo sapiens zinc finger protein 304... 29 8.0
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 99 bits (238), Expect = 5e-21
Identities = 47/100 (47%), Positives = 69/100 (69%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 57 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 116
Query: 427 AVRYSNVVINLVGRDYEN*EFQIQ*CSLDGVRRIARICRE 546
V++SNVVINL+GRD+E F + + + IA++ +E
Sbjct: 117 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 156
Score = 33.1 bits (72), Expect = 0.65
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 32 RQLHHALMPHGKGGRSSVSGIVATVFGA 59
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 99 bits (238), Expect = 5e-21
Identities = 47/100 (47%), Positives = 69/100 (69%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 427 AVRYSNVVINLVGRDYEN*EFQIQ*CSLDGVRRIARICRE 546
V++SNVVINL+GRD+E F + + + IA++ +E
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 33.1 bits (72), Expect = 0.65
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGA 61
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 99 bits (238), Expect = 5e-21
Identities = 47/100 (47%), Positives = 69/100 (69%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 427 AVRYSNVVINLVGRDYEN*EFQIQ*CSLDGVRRIARICRE 546
V++SNVVINL+GRD+E F + + + IA++ +E
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 33.1 bits (72), Expect = 0.65
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGA 61
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 99 bits (238), Expect = 5e-21
Identities = 47/100 (47%), Positives = 69/100 (69%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 427 AVRYSNVVINLVGRDYEN*EFQIQ*CSLDGVRRIARICRE 546
V++SNVVINL+GRD+E F + + + IA++ +E
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 33.1 bits (72), Expect = 0.65
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGA 61
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 99 bits (238), Expect = 5e-21
Identities = 47/100 (47%), Positives = 69/100 (69%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 20 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 79
Query: 427 AVRYSNVVINLVGRDYEN*EFQIQ*CSLDGVRRIARICRE 546
V++SNVVINL+GRD+E F + + + IA++ +E
Sbjct: 80 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 119
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 203 GTGGRSSFNGIVATVFGS 256
G GGRSS +GIVATVFG+
Sbjct: 5 GKGGRSSVSGIVATVFGA 22
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 99 bits (238), Expect = 5e-21
Identities = 47/100 (47%), Positives = 69/100 (69%)
Frame = +1
Query: 247 FRFTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAK 426
F TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI +
Sbjct: 59 FGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRR 118
Query: 427 AVRYSNVVINLVGRDYEN*EFQIQ*CSLDGVRRIARICRE 546
V++SNVVINL+GRD+E F + + + IA++ +E
Sbjct: 119 VVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 158
Score = 33.1 bits (72), Expect = 0.65
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 173 RKPNLAAYKRGTGGRSSFNGIVATVFGS 256
R+ + A G GGRSS +GIVATVFG+
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGA 61
>BC111532-1|AAI11533.1| 706|Homo sapiens ZNF304 protein protein.
Length = 706
Score = 29.5 bits (63), Expect = 8.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 322 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVR 435
++GD YD Q L CGD G+ + LLD + VR
Sbjct: 260 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVR 296
>BC111531-1|AAI11532.1| 617|Homo sapiens ZNF304 protein protein.
Length = 617
Score = 29.5 bits (63), Expect = 8.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 322 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVR 435
++GD YD Q L CGD G+ + LLD + VR
Sbjct: 171 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVR 207
>AJ276316-1|CAC06610.1| 659|Homo sapiens zinc finger protein 304
protein.
Length = 659
Score = 29.5 bits (63), Expect = 8.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 322 YRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVR 435
++GD YD Q L CGD G+ + LLD + VR
Sbjct: 213 HQGD-YDGQMLFSCGDEGKAFLDTFTLLDSQMTHAEVR 249
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,495,771
Number of Sequences: 237096
Number of extensions: 1612170
Number of successful extensions: 1892
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1892
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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