Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0297
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.2  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   8.3  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   8.3  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/21 (33%), Positives = 18/21 (85%)
 Frame = -2

Query: 436 IQVLSHVSEEGTERLSEAGEV 374
           ++ +S+V ++GTE ++++G+V
Sbjct: 184 LESISYVKDDGTEGIAKSGDV 204


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 549 DCIPSGFEVIDS 514
           DCI SG E +DS
Sbjct: 35  DCIQSGIENLDS 46


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 549 DCIPSGFEVIDS 514
           DCI SG E +DS
Sbjct: 51  DCIQSGIENLDS 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,861
Number of Sequences: 438
Number of extensions: 3301
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)