Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0296
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015210-1|AAT94439.1|  462|Drosophila melanogaster RE57622p pro...    30   1.8  
AE014298-2831|AAF48946.2|  462|Drosophila melanogaster CG8028-PA...    30   1.8  
X17551-1|CAA35586.1|  565|Drosophila melanogaster ORF1 for putat...    28   9.5  
BT014916-1|AAT47767.1|  409|Drosophila melanogaster RE14563p pro...    28   9.5  
AY122108-1|AAM52620.1|  593|Drosophila melanogaster GH12004p pro...    28   9.5  
AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-P...    28   9.5  

>BT015210-1|AAT94439.1|  462|Drosophila melanogaster RE57622p
           protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 194 PSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYT 78
           P+ +  L  C  PGST  C    P+  P+KGSP +  ++
Sbjct: 394 PASRRSLDFCA-PGSTFHCLWSLPTTCPRKGSPLAMAFS 431


>AE014298-2831|AAF48946.2|  462|Drosophila melanogaster CG8028-PA
           protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 194 PSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYT 78
           P+ +  L  C  PGST  C    P+  P+KGSP +  ++
Sbjct: 394 PASRRSLDFCA-PGSTFHCLWSLPTTCPRKGSPLAMAFS 431


>X17551-1|CAA35586.1|  565|Drosophila melanogaster ORF1 for putative
           RNA bindingprotein protein.
          Length = 565

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -1

Query: 185 KHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYTLN 72
           K    +C EP +T  CP      S +K S   + +T N
Sbjct: 400 KSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTAN 437


>BT014916-1|AAT47767.1|  409|Drosophila melanogaster RE14563p
           protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -1

Query: 185 KHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYTLN 72
           K    +C EP +T  CP      S +K S   + +T N
Sbjct: 244 KSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTAN 281


>AY122108-1|AAM52620.1|  593|Drosophila melanogaster GH12004p
           protein.
          Length = 593

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 254 VLVTAATGSMGPADGALLLSPSRKHFLFICVE 159
           V   AA  + GP D +   SPS    LF+C++
Sbjct: 72  VAALAAPLTSGPGDSSATPSPSLSFILFVCID 103


>AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-PA
           protein.
          Length = 1424

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 254 VLVTAATGSMGPADGALLLSPSRKHFLFICVE 159
           V   AA  + GP D +   SPS    LF+C++
Sbjct: 903 VAALAAPLTSGPGDSSATPSPSLSFILFVCID 934


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,809,960
Number of Sequences: 53049
Number of extensions: 570966
Number of successful extensions: 2101
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)