Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0296
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   1.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   1.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.7  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   6.2  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   8.2  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 500 GFERVQLYNGNCPH*CRFQPLERIRKRS 417
           G  + Q  NG+C H C   P  RI  +S
Sbjct: 32  GMNQCQAVNGHCSHLC--LPAPRINSKS 57


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 500 GFERVQLYNGNCPH*CRFQPLERIRKRS 417
           G  + Q  NG+C H C   P  RI  +S
Sbjct: 32  GMNQCQAVNGHCSHLC--LPAPRINSKS 57


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 270 NSARGGSSHRRYRQHGSSGW 211
           N++RG S       HGS  W
Sbjct: 392 NNSRGHSGQSSSHHHGSKSW 411


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 472 PLYNWTLSKPKLQTVVCSVEIE 537
           PL+ W    P+   V CSV  E
Sbjct: 33  PLFGWGSYGPEAGNVSCSVSWE 54


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 303 FGAPLLLSTANNSVAEVFKGPMFPSDLIXFV 395
           FG  LLL+ A+NSV  + K  +  S  + ++
Sbjct: 13  FGVLLLLTNADNSVHILSKYQLITSTTLNWL 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,074
Number of Sequences: 438
Number of extensions: 3128
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)