Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0293
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.   124   2e-30
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.   124   2e-30
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.   124   2e-30
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.   124   2e-30
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   1.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   1.6  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   5.0  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    23   6.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.8  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  124 bits (299), Expect = 2e-30
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 1   TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTL 180
           TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT 
Sbjct: 128 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 187

Query: 181 Q 183
           Q
Sbjct: 188 Q 188


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  124 bits (299), Expect = 2e-30
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 1   TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTL 180
           TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT 
Sbjct: 128 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 187

Query: 181 Q 183
           Q
Sbjct: 188 Q 188


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  124 bits (299), Expect = 2e-30
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 1   TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTL 180
           TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT 
Sbjct: 128 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 187

Query: 181 Q 183
           Q
Sbjct: 188 Q 188


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  124 bits (299), Expect = 2e-30
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 1   TMSGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALTVPELTL 180
           TMSG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYRALTVPELT 
Sbjct: 128 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 187

Query: 181 Q 183
           Q
Sbjct: 188 Q 188


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/53 (26%), Positives = 19/53 (35%)
 Frame = +1

Query: 391 KWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKPSCTGTLVRYG*NGVHGGQSPT 549
           +W R     RR   PY  G +  +W  L    +C   L+  G     G    T
Sbjct: 117 RWTRSGATGRRQPHPYRAGRVGQTWQRLLSVTTCGLLLLLLGATVCRGANGAT 169


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/53 (26%), Positives = 19/53 (35%)
 Frame = +1

Query: 391 KWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKPSCTGTLVRYG*NGVHGGQSPT 549
           +W R     RR   PY  G +  +W  L    +C   L+  G     G    T
Sbjct: 117 RWTRSGATGRRQPHPYRAGRVGQTWQRLLSVTTCGLLLLLLGATVCRGANGAT 169


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 431 LYGRRVTNEGRSHFKTPRR 375
           L+G  + N+G  ++KTPR+
Sbjct: 500 LFGDLLKNKGAQNYKTPRQ 518


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -3

Query: 389 KTPRRYVTHGNLAVIGYPLDKI--RAVFVLN 303
           K+P + V H    +IG P D+I  RA F LN
Sbjct: 71  KSPTKPVQHVCKRIIGMPGDRIMTRASFNLN 101


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 345 WVSTRQNTCCFCSEYSPVARQLLS 274
           W     N  CF +   P AR LLS
Sbjct: 189 WEYRAPNAPCFTAPVKPKARNLLS 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,678
Number of Sequences: 2352
Number of extensions: 13390
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)