Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0293
(550 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.38
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 0.67
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 23 2.0
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 22 3.6
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 4.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.7
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 21 8.2
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 8.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 8.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 8.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 8.2
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.38
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 199 FWRRTFAASARVQLKLDTVELLATSAAQSQ 110
FW + AA ARV L + ++ L+T A+SQ
Sbjct: 266 FWIKPEAAPARVTLGVTSLLTLSTQHAKSQ 295
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 24.6 bits (51), Expect = 0.67
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 199 FWRRTFAASARVQLKLDTVELLATSAAQSQ 110
FW + A ARV L + ++ LAT QSQ
Sbjct: 235 FWIKPEAIPARVTLGVTSLLTLATQNTQSQ 264
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 23.0 bits (47), Expect = 2.0
Identities = 7/30 (23%), Positives = 15/30 (50%)
Frame = -1
Query: 502 VYQCKKAFRLNIATNCSDTLLNMVCMAVVL 413
+Y CK+ + AT+C ++ C ++
Sbjct: 171 LYNCKRTATITAATDCQLWAIDRQCFQTIM 200
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 22.2 bits (45), Expect = 3.6
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -1
Query: 280 SFIDIRPLKSSQRSNTSRVEDHTRPSC 200
+F+ ++P+KS ++ + R SC
Sbjct: 14 TFVALKPVKSMSADQVEKLAKNMRKSC 40
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 4.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 199 FWRRTFAASARVQLKLDTVELLAT 128
FW A SARV L + TV + T
Sbjct: 263 FWINHEATSARVALGITTVLTMTT 286
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 4.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 245 TVKYLPCRGSHATIMFLASNICSVSSGT 162
T KY+ +A + LAS I S S+GT
Sbjct: 2 TAKYVFTTLINAAFLCLASTILSESAGT 29
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/29 (27%), Positives = 12/29 (41%)
Frame = +3
Query: 96 AFLHPWLCAADVARSSTVSSFNCTRADAA 182
AF PWL + + F+C + A
Sbjct: 51 AFSRPWLLQGHIRTHTGEKPFSCQHCNRA 79
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 28 RFPGQLNADLRKLAVNMVPFPRLHFYTP 111
R+ G L A RKL N + YTP
Sbjct: 392 RYYGSLQAAARKLLGNAPEVENIWDYTP 419
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 500 VPVQEGFPPKHSHELLRHPL 441
+PV + FP ++ HE PL
Sbjct: 450 LPVLKNFPTRYIHEPWNAPL 469
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 8.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 199 FWRRTFAASARVQLKLDTVELLATSAA 119
FW A ARV L + T+ +AT +
Sbjct: 263 FWLDQSAVPARVSLGVTTLLTMATQTS 289
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 8.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 199 FWRRTFAASARVQLKLDTVELLATSAA 119
FW A ARV L + T+ +AT +
Sbjct: 263 FWLDQSAVPARVSLGVTTLLTMATQTS 289
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,210
Number of Sequences: 438
Number of extensions: 3369
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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