Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0291
(550 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 129 3e-31
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 59 4e-10
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 58 9e-10
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 57 1e-09
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 56 3e-09
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 55 6e-09
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 46 3e-06
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 44 1e-05
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 44 1e-05
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 44 2e-05
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 40 2e-04
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 40 2e-04
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 29 0.45
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 28 0.79
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 28 1.0
SPAC140.01 |sdh2||succinate dehydrogenase |Schizosaccharomyces p... 27 1.8
SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces ... 27 1.8
SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog Mde5|S... 27 1.8
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 1.8
SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1|... 27 2.4
SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces po... 26 3.2
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 25 5.6
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 25 5.6
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 25 7.3
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 25 9.7
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa... 25 9.7
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 25 9.7
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 25 9.7
SPCC645.03c |isa1||iron-sulfur protein Isa1|Schizosaccharomyces ... 25 9.7
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 129 bits (311), Expect = 3e-31
Identities = 52/82 (63%), Positives = 65/82 (79%)
Frame = +3
Query: 3 YLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
YL L+ +PV V A+P NILEWHY++ GP +PYEGG YH +IFP ++PFKPP+I M
Sbjct: 14 YLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRM 73
Query: 183 ITPNGRFKTNTRLCLSITDFHP 248
ITP+GRF+TNTRLCLS +DFHP
Sbjct: 74 ITPSGRFQTNTRLCLSFSDFHP 95
Score = 61.7 bits (143), Expect = 7e-11
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +2
Query: 254 WNPAWSISTILTGLLSFMLEKTPTLGSIETSEYQKRCLAAESLEINI-KNKMFCELFPEY 430
WNP+W +STIL GL+SFM T G I TSE +R A ++ NI N F +FPE
Sbjct: 98 WNPSWMVSTILVGLVSFMTSDEITTGGIVTSESTRRTYAKDTKRFNIMDNPKFLIMFPEL 157
Query: 431 VEEIEQQLKQRQEAMLLNQDSGANEVPLS 517
+++ + + + L + + P+S
Sbjct: 158 IDKNREDIAKAAAEAALIEPQQIHSTPVS 186
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 59.3 bits (137), Expect = 4e-10
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 12 LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
L DP +A PV ++ W + GP SPY GG + I FP ++PFKPP + T
Sbjct: 13 LGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTR 72
Query: 192 --NGRFKTNTRLCLSI 233
+ +N +CL I
Sbjct: 73 IYHPNINSNGSICLDI 88
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 58.0 bits (134), Expect = 9e-10
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 YLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
Y L+ P+P + V N+ W GP S Y GG +H + FP ++PF+PP+I
Sbjct: 16 YSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEF 75
Query: 183 ITP--NGRFKTNTRLCLSI 233
T + F + +CL+I
Sbjct: 76 TTRIYHPNFDSEGNVCLAI 94
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 57.2 bits (132), Expect = 1e-09
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 12 LKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP 191
L DP P + A P N+ + ++GP++S YEGG +H ++ P E+P PP++ +T
Sbjct: 14 LTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTK 73
Query: 192 --NGRFKTNTRLCLS 230
+ R+CLS
Sbjct: 74 IYHPNVDKLGRICLS 88
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 56.0 bits (129), Expect = 3e-09
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 YLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYM 182
+ R++ DP V+A PV N++ W+ V+ GP +P+E G + + F ++P KPP +
Sbjct: 13 FKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKF 72
Query: 183 ITP--NGRFKTNTRLCLSI 233
++ + N LCL I
Sbjct: 73 VSTMFHPNVYANGELCLDI 91
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 55.2 bits (127), Expect = 6e-09
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 KNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP- 191
KN P + +I EW ++ GPE + YEGG++H + FP+++P PP + T
Sbjct: 19 KNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEI 78
Query: 192 -NGRFKTNTRLCLSITDFHP 248
+ N +C+SI HP
Sbjct: 79 WHPNVHPNGEVCISI--LHP 96
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 46.4 bits (105), Expect = 3e-06
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +3
Query: 60 NILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIY----MITPNGRFKTNTRLCL 227
++ W V++GP ++PYEGG + I +P PPS+Y ++ PN + TN +C+
Sbjct: 33 DMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISW-TNGEVCM 91
Query: 228 SITDFH 245
I H
Sbjct: 92 DILKTH 97
Score = 26.6 bits (56), Expect = 2.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 251 HWNPAWSISTILTGLLSFM 307
HW+PAWS+ + ++S +
Sbjct: 97 HWSPAWSLQSACLAIISLL 115
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 44.0 bits (99), Expect = 1e-05
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 30 PYVTAEP-VPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP--NGR 200
P ++A P SN+L W + GP + YEG + + FP +P+ PP+I +P +
Sbjct: 46 PGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPN 105
Query: 201 FKTNTRLCLSI 233
+ +CL I
Sbjct: 106 VDMSGNICLDI 116
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 44.0 bits (99), Expect = 1e-05
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +3
Query: 87 KGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT----PNGRFKTNTRLCLSI 233
+GPE +PYEGGY+ I P ++PF+PP + T PN +T +CL I
Sbjct: 41 RGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGA-ICLDI 92
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 43.6 bits (98), Expect = 2e-05
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 3 YLRLKNDPVPYVTAEPV-PSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
Y L + +TA P + W +++GP+ +P+EGG Y + FP ++P PP++
Sbjct: 14 YKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTL 72
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 60 NILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMITP--NGRFKTNTRLCLSI 233
+++ W + G K+ +EGG Y + FP E+P +PP P + + +CLSI
Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 39.9 bits (89), Expect = 2e-04
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 51 VPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSI 176
V N+ E++ GP ++PY GG + + P E+P+K PSI
Sbjct: 25 VNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSI 66
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 29.1 bits (62), Expect = 0.45
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 45 EPVPSNILEWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT----PNGRFKTN 212
+P+ N+L H ++ P++ Y+GG + +I +P PP + + PN + N
Sbjct: 47 DPIKLNVL--HLEIR-PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGN 103
Query: 213 TRLCLSITDFHP 248
L + D++P
Sbjct: 104 VCLNILRQDWNP 115
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 28.3 bits (60), Expect = 0.79
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 69 EWHYVVKGPEKSPYEGGYYHXKIIFPREFPFKPPSIYMIT 188
+W+ + GP S +E Y KI +P PP + ++
Sbjct: 40 DWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVS 79
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 187 HRMAGSRQTHDCASVLQTFIRTLEPCLVYFYDPYRSVEFYVGEDSYI 327
HR + +T +LQ +T+ P FYD Y + +F +D YI
Sbjct: 550 HRESVRFETGVATFLLQEVKKTVLPLYQRFYDKYINSDFTKNKDKYI 596
>SPAC140.01 |sdh2||succinate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 252
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 244 IRTLEPCLVYFYDPYRSVEFYVGEDS 321
++ L P L YFY Y+S+E ++ D+
Sbjct: 117 VKDLVPDLTYFYKQYKSIEPWLQNDN 142
>SPAC17A2.03c |vma6||V-type ATPase subunit d|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 343
Score = 27.1 bits (57), Expect = 1.8
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +2
Query: 203 QDKHTIVPQYYRLSSGHWNPAWSISTILTGLLSFMLEKTPTLGSIETSEYQKRCLAAESL 382
QD H ++ + + L PA ++T + L S +L +TP + Y K CL+A+ L
Sbjct: 116 QDTHDLLERCHPLGWFETLPALCVATNVEELYSVVLIETP------LAPYFKDCLSADDL 169
Query: 383 EINIKNKMFCELFPEYVEE 439
+ + L+ Y+E+
Sbjct: 170 DEQHIEIIRNTLYKAYLED 188
>SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog
Mde5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 153 FPFKPPSIYMITP-NGRFKTNTRLCLSITDFHPDTGTLLGLFLRS 284
FP + + + P N R T + +++ H TLLGLFL S
Sbjct: 272 FPVQGVAAESVIPLNDRALRKTAIAMNLVAHHCKDSTLLGLFLES 316
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 323 TLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQQLKQRQEAMLLNQD 490
T+ +E +KR L + LE+ + PE + + ++LK R+E+ + +D
Sbjct: 462 TIVDLENMYREKRNLVLDCLEVLQISVDDTSNIPEIIARLSEKLKDREESEAVTED 517
>SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 26.6 bits (56), Expect = 2.4
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +2
Query: 263 AWSISTILTGLLSFMLEKTPTLGSIETSEYQKR--CLAAESLEINIKNKMFCELFPEYVE 436
+W ++ +LSF K L + +EY K + +N++ + C + YV
Sbjct: 295 SWLFQDVVPPVLSFSTAKAGFLSILPIAEYTKTLDLIFHRGFTVNLRMRFQCSIM-RYVG 353
Query: 437 EIEQQLKQRQEAML--LNQDSGANEVPLSHSL 526
E + + Q ++L L D G N +S L
Sbjct: 354 EHSTHICEGQYSVLNELLIDRGPNPFMISLDL 385
>SPBC18H10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 432
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 212 HTIVPQYYRLSSGHWNPAWSI 274
+ +V QY+ L+ GH+N AWS+
Sbjct: 112 YNLVLQYH-LAKGHYNAAWSL 131
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/52 (19%), Positives = 28/52 (53%)
Frame = +2
Query: 323 TLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQQLKQRQEAML 478
++ S +E + +++ +N + F + F + EE+E+Q+++ E ++
Sbjct: 158 SINSASGTEIRTSLRSSKGKSVNYNEQEFYDDFEDEEEEVEEQVEEEYEPII 209
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 527 LDCGSEVLHLHHCLDSTTLPLVVVLIAV 444
L C S+ L + H D +T+P ++ IAV
Sbjct: 465 LVCSSQDLMMEHSNDFSTMPTMIASIAV 492
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/34 (26%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 435 STYSGN-NSQNILFFMFISRDSAAKHRFWYSEVS 337
++ +GN N+Q ++ ++F +R + + +WY+E +
Sbjct: 506 ASMAGNANAQFLMGYLFDTRGNTEQATYWYNEAA 539
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +2
Query: 134 DYFPKGISVQTTFDLH-DNTE 193
+Y+P+ +S+Q + D+H NTE
Sbjct: 106 EYYPRSVSMQQSQDVHFQNTE 126
>SPBC13E7.06 |msd1|mug172|spindle pole body protein
Msd1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 331
Score = 24.6 bits (51), Expect = 9.7
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 308 LEKTPTLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQQLK-----QRQEA 472
LEK L +I+ +EY+K+ + +KN++ EL Y E + QL +R +A
Sbjct: 63 LEKESLLDAIKNNEYEKQ--RDNNTIKRLKNEL--EL---YQNECQLQLNKVRTLERDQA 115
Query: 473 MLLNQDSGANEVPLSHSL 526
L+ Q+ G +V + L
Sbjct: 116 ELITQNKGLKDVNAKNEL 133
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 488 LDSTTLPLVVVLIAVQSPLHIQGTIHKTFYFLCLSLEILQPNIAFGI 348
++S+ LP + I + P Q + FY C I IA+G+
Sbjct: 190 VESSLLPTMEATIGMFFPHSEQALLQPFFYISCYGCNIPAGFIAYGV 236
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 24.6 bits (51), Expect = 9.7
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 303 LCWRRLLHWGPLKLQNTK 356
+CW ++ WG LK+ ++K
Sbjct: 645 ICWHKIKGWGFLKILSSK 662
>SPCC645.03c |isa1||iron-sulfur protein Isa1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 190
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -3
Query: 209 CL-EPAIRCYHVNRRWFERK 153
CL +PA+RC VNR F RK
Sbjct: 4 CLSKPALRCRSVNRLQFLRK 23
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,471,190
Number of Sequences: 5004
Number of extensions: 54614
Number of successful extensions: 202
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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