Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0290
         (559 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498FCA Cluster: hypothetical protein 75.t00022; ...    37   0.37 
UniRef50_Q4MYW8 Cluster: T-complex protein 1, beta subunit, puta...    35   1.1  
UniRef50_Q2ANW9 Cluster: Cyclic peptide transporter precursor; n...    33   6.0  

>UniRef50_UPI0000498FCA Cluster: hypothetical protein 75.t00022;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 75.t00022 - Entamoeba histolytica HM-1:IMSS
          Length = 1687

 Score = 36.7 bits (81), Expect = 0.37
 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -3

Query: 272 SHAFFTLRHVILRYI--SLFWPNSKLKSKYWTEKCALMSVTIL 150
           SH+F ++R++ILR+I    +WPN  L+ +Y  E    MS T+L
Sbjct: 427 SHSFLSIRNIILRHIFDIRWWPNDSLRVEYIKELQESMSHTVL 469


>UniRef50_Q4MYW8 Cluster: T-complex protein 1, beta subunit,
           putative; n=2; Theileria|Rep: T-complex protein 1, beta
           subunit, putative - Theileria parva
          Length = 664

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
 Frame = +1

Query: 22  NRSFNKQNIRRYTHINFLLILT-QH*TYTRHY-FYINSLCTTCSYNIVTDINAHFSVQYL 195
           N++ N   I  Y  I F LI    H + T++Y F + +LC + ++NI    N      YL
Sbjct: 47  NKNINNDIINCYCSIYFQLISPLYHESSTQYYLFTLRTLCRSLTFNIFRQNNCFLFYTYL 106

Query: 196 LFNLEL--GQNREIYRKIT*RRVKNACE 273
           L N  +   Q+   Y +IT   +K   +
Sbjct: 107 LLNFPVIHFQHSNDYAEITPEILKGGAQ 134


>UniRef50_Q2ANW9 Cluster: Cyclic peptide transporter precursor; n=4;
           cellular organisms|Rep: Cyclic peptide transporter
           precursor - Bacillus weihenstephanensis KBAB4
          Length = 1055

 Score = 32.7 bits (71), Expect = 6.0
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = -2

Query: 366 VFPLHTLLK--PDEIVFIRN-FLNLVTGFVVNASLTRIFYSSSRNLAIYF 226
           VFPLH      P  ++ + + F N +  F++N +LTR  YSS+ +L +YF
Sbjct: 504 VFPLHNKKNFFPIFVLSVTSGFGNAMIIFIINEALTRSNYSSNNSLFLYF 553


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,021,866
Number of Sequences: 1657284
Number of extensions: 9550155
Number of successful extensions: 18872
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18870
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)