Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0290
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.5  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 100 YTRHYFYINSLCTTCSYNIVT 162
           ++R  F+INS      YNI++
Sbjct: 337 FSRIMFHINSAVNPILYNIIS 357


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 272 SHAFFTLRHVILRYISLFWPNSKLKSKYWTEKCALMSV 159
           +H F  LR ++L   S   P+S    +  T + A +SV
Sbjct: 294 AHEFACLRAIVLFKTSFEKPSSSSNQEKTTTESAKISV 331


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 366 VFPLHTLLKPDEIVFIRNF 310
           V P+H     ++I F+R F
Sbjct: 288 VIPIHVWTSKEKISFLRGF 306


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,899
Number of Sequences: 336
Number of extensions: 2793
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)