Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0287
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06477 Cluster: IFN-response element binding factor 2; ... 143 3e-33
UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-len... 107 1e-22
UniRef50_Q6NXQ0 Cluster: SFRS2 protein; n=4; Homo/Pan/Gorilla gr... 107 1e-22
UniRef50_Q9BRL6 Cluster: Splicing factor, arginine/serine-rich 2... 95 8e-19
UniRef50_Q09511 Cluster: Probable splicing factor, arginine/seri... 84 3e-15
UniRef50_UPI00005C16F5 Cluster: PREDICTED: similar to Sfrs2-prov... 72 1e-11
UniRef50_Q018R2 Cluster: RSP4_CAEEL Probable splicing factor, ar... 67 3e-10
UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus lu... 64 2e-09
UniRef50_A7QII5 Cluster: Chromosome chr12 scaffold_103, whole ge... 62 1e-08
UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6; Mag... 60 3e-08
UniRef50_UPI0000DBF0C6 Cluster: UPI0000DBF0C6 related cluster; n... 58 2e-07
UniRef50_A2APT2 Cluster: Novel protein; n=3; Murinae|Rep: Novel ... 57 3e-07
UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1; ... 57 3e-07
UniRef50_A7ARN5 Cluster: Ser/Arg-rich splicing factor, putative;... 56 6e-07
UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium (Vin... 55 1e-06
UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18; Eute... 54 2e-06
UniRef50_UPI0000D55448 Cluster: PREDICTED: similar to Splicing f... 53 4e-06
UniRef50_Q9FYA9 Cluster: SC35-like splicing factor SCL30, 30 kD;... 51 2e-05
UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22; Euk... 50 4e-05
UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich pr... 50 4e-05
UniRef50_Q5CF61 Cluster: Dentin phosphoryn; n=2; Cryptosporidium... 50 5e-05
UniRef50_Q2QNB0 Cluster: RNA recognition motif family protein, e... 49 7e-05
UniRef50_Q1PDV2 Cluster: 28 kDa SC35-like splicing factor; n=9; ... 47 3e-04
UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1 pro... 47 4e-04
UniRef50_Q9P4V6 Cluster: RNA-binding protein; n=3; Saccharomycet... 47 4e-04
UniRef50_Q8MYR4 Cluster: SD14970p; n=2; Drosophila melanogaster|... 46 5e-04
UniRef50_Q8DIY8 Cluster: RNA binding protein; n=3; Cyanobacteria... 46 7e-04
UniRef50_A5KAW4 Cluster: Ser/Arg-rich splicing factor, putative;... 46 7e-04
UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of str... 46 7e-04
UniRef50_UPI0000DB7622 Cluster: PREDICTED: similar to CG3335-PA;... 46 9e-04
UniRef50_UPI0000498562 Cluster: RNA-binding protein; n=1; Entamo... 46 9e-04
UniRef50_UPI0000D997C2 Cluster: PREDICTED: similar to FUS intera... 45 0.002
UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep: CG3... 44 0.002
UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1; Nitros... 44 0.003
UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1; Op... 44 0.003
UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative; ... 44 0.003
UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protei... 44 0.004
UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2; The... 44 0.004
UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein; ... 43 0.006
UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10... 43 0.006
UniRef50_O75821 Cluster: Eukaryotic translation initiation facto... 43 0.006
UniRef50_UPI00015560CE Cluster: PREDICTED: similar to heterogene... 42 0.008
UniRef50_P09651 Cluster: Heterogeneous nuclear ribonucleoprotein... 42 0.008
UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1; ... 42 0.011
UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1; ... 42 0.011
UniRef50_Q2GTP8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.011
UniRef50_P62995 Cluster: Splicing factor, arginine/serine-rich 1... 42 0.011
UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3; ... 42 0.015
UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2... 42 0.015
UniRef50_Q24847 Cluster: Surface antigen protein; n=3; Entamoeba... 42 0.015
UniRef50_P51991 Cluster: Heterogeneous nuclear ribonucleoprotein... 42 0.015
UniRef50_A7P058 Cluster: Chromosome chr6 scaffold_3, whole genom... 41 0.019
UniRef50_Q6X9Z2 Cluster: HnRNP core protein A1; n=2; Laurasiathe... 41 0.019
UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3; Endopterygota|... 41 0.019
UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative; ... 41 0.019
UniRef50_A1DGG0 Cluster: Small subunit of nuclear cap-binding pr... 41 0.019
UniRef50_UPI00015B5DA3 Cluster: PREDICTED: similar to CG3335-PA;... 41 0.025
UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;... 41 0.025
UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;... 41 0.025
UniRef50_Q6ID29 Cluster: At4g13860; n=9; cellular organisms|Rep:... 41 0.025
UniRef50_A4RWB3 Cluster: Predicted protein; n=2; Ostreococcus|Re... 41 0.025
UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma j... 41 0.025
UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein, putat... 41 0.025
UniRef50_Q9Y4C8 Cluster: Probable RNA-binding protein 19; n=30; ... 41 0.025
UniRef50_O14327 Cluster: Polyadenylate-binding protein 2 (Poly(A... 41 0.025
UniRef50_P78795 Cluster: Probable eukaryotic translation initiat... 41 0.025
UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459 ... 40 0.034
UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome sh... 40 0.034
UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:... 40 0.034
UniRef50_A5JZY0 Cluster: RNA binding protein, putative; n=2; Euk... 40 0.034
UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1; ... 40 0.034
UniRef50_Q2UQ21 Cluster: Predicted protein; n=3; Pezizomycotina|... 40 0.034
UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2; ce... 40 0.044
UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP... 40 0.044
UniRef50_A4RUB8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 40 0.044
UniRef50_Q9VZE4 Cluster: CG1316-PA; n=5; Diptera|Rep: CG1316-PA ... 40 0.044
UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1; T... 40 0.044
UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39; Euteleo... 40 0.044
UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome sh... 40 0.059
UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN ... 40 0.059
UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h... 40 0.059
UniRef50_P73557 Cluster: RNA-binding protein; n=2; Chroococcales... 40 0.059
UniRef50_A7PHW6 Cluster: Chromosome chr13 scaffold_17, whole gen... 40 0.059
UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus lu... 40 0.059
UniRef50_Q4UCX7 Cluster: RNA poly(A)-binding protein, putative; ... 40 0.059
UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Re... 40 0.059
UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.059
UniRef50_P48810 Cluster: Heterogeneous nuclear ribonucleoprotein... 40 0.059
UniRef50_Q6PNM9 Cluster: AUF1 similar protein; n=3; Paracentrotu... 39 0.078
UniRef50_Q5CX28 Cluster: RRM domain containing protein; T22E16.1... 39 0.078
UniRef50_Q6ZR81 Cluster: CDNA FLJ46566 fis, clone THYMU3040829, ... 39 0.078
UniRef50_Q7ZWE3 Cluster: La-related protein 7; n=3; Clupeocephal... 39 0.078
UniRef50_P41891 Cluster: Protein gar2; n=12; Ascomycota|Rep: Pro... 39 0.078
UniRef50_Q14011 Cluster: Cold-inducible RNA-binding protein; n=6... 39 0.078
UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid CG16... 39 0.10
UniRef50_UPI00006CFFFC Cluster: RNA binding protein; n=1; Tetrah... 39 0.10
UniRef50_Q9CAE4 Cluster: Putative uncharacterized protein F13M14... 39 0.10
UniRef50_Q1PEP5 Cluster: Nucleolin; n=2; Arabidopsis thaliana|Re... 39 0.10
UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2; Ostreococcus... 39 0.10
UniRef50_Q95ZH1 Cluster: RBD protein; n=1; Chironomus tentans|Re... 39 0.10
UniRef50_Q54CU2 Cluster: RNA-binding region-containing protein; ... 39 0.10
UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;... 39 0.10
UniRef50_A7SCR4 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.10
UniRef50_A7AN88 Cluster: RNA recognition motif domain containing... 39 0.10
UniRef50_A2QMQ9 Cluster: Function: AUF1 of H. sapiens is a compo... 39 0.10
UniRef50_UPI00005A129E Cluster: PREDICTED: similar to Heterogene... 38 0.14
UniRef50_UPI000065DEA8 Cluster: RNA-binding protein 24 (RNA-bind... 38 0.14
UniRef50_A7QJZ9 Cluster: Chromosome undetermined scaffold_109, w... 38 0.14
UniRef50_Q17DU7 Cluster: RNA binding motif protein; n=3; Culicid... 38 0.14
UniRef50_A7AT82 Cluster: RNA recognition motif containing protei... 38 0.14
UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative; ... 38 0.14
UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.14
UniRef50_Q0CIN3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.14
UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;... 38 0.14
UniRef50_Q6DRI6 Cluster: KIAA0682-like; n=7; Danio rerio|Rep: KI... 38 0.18
UniRef50_Q8I5N6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.18
UniRef50_Q7R874 Cluster: RNA recognition motif, putative; n=6; P... 38 0.18
UniRef50_A7SIF0 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.18
UniRef50_Q7RXY7 Cluster: Putative uncharacterized protein NCU004... 38 0.18
UniRef50_Q5KLP3 Cluster: Poly(A) binding protein, putative; n=1;... 38 0.18
UniRef50_Q22037 Cluster: Heterogeneous nuclear ribonucleoprotein... 38 0.18
UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41... 38 0.18
UniRef50_Q08208 Cluster: Nucleolar protein 12; n=5; Saccharomyce... 38 0.18
UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1; ... 38 0.18
UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamo... 38 0.24
UniRef50_Q9SVM7 Cluster: RNA-binding protein like; n=1; Arabidop... 38 0.24
UniRef50_Q0ITI7 Cluster: Os11g0250000 protein; n=5; Oryza sativa... 38 0.24
UniRef50_Q8I2R8 Cluster: RNA-binding protein, putative; n=5; Pla... 38 0.24
UniRef50_Q4UFE0 Cluster: Nucleolar, RNA-binding protein, putativ... 38 0.24
UniRef50_A7AW01 Cluster: RNA recognition motif domain containing... 38 0.24
UniRef50_Q9P383 Cluster: Nuclear cap-binding complex small subun... 38 0.24
UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n... 38 0.24
UniRef50_UPI000049956B Cluster: RNA-binding protein; n=1; Entamo... 37 0.31
UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11; Magnoliophyt... 37 0.31
UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidop... 37 0.31
UniRef50_A7QRC1 Cluster: Chromosome chr13 scaffold_149, whole ge... 37 0.31
UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma j... 37 0.31
UniRef50_O45713 Cluster: Putative uncharacterized protein; n=5; ... 37 0.31
UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, wh... 37 0.31
UniRef50_Q8TBF4 Cluster: Zinc finger CCHC-type and RNA-binding m... 37 0.31
UniRef50_Q13595 Cluster: Transformer-2 protein homolog; n=57; Eu... 37 0.31
UniRef50_Q57014 Cluster: Putative RNA-binding protein rbpA; n=70... 37 0.31
UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplas... 37 0.31
UniRef50_UPI000051A8B9 Cluster: PREDICTED: similar to CG1316-PA;... 37 0.41
UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome s... 37 0.41
UniRef50_O35698 Cluster: RNA-binding protein; n=7; Mus musculus|... 37 0.41
UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular org... 37 0.41
UniRef50_Q9LNV4 Cluster: F22G5.31; n=12; Magnoliophyta|Rep: F22G... 37 0.41
UniRef50_Q9U5E3 Cluster: CiMsi; n=1; Ciona intestinalis|Rep: CiM... 37 0.41
UniRef50_A7SCX6 Cluster: Predicted protein; n=1; Nematostella ve... 37 0.41
UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_A1DIK1 Cluster: Translation initiation factor 4B; n=8; ... 37 0.41
UniRef50_Q4SLY2 Cluster: Chromosome 13 SCAF14555, whole genome s... 36 0.55
UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6; c... 36 0.55
UniRef50_Q01B63 Cluster: RNA recognition motif; n=2; Ostreococcu... 36 0.55
UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole geno... 36 0.55
UniRef50_Q93233 Cluster: Putative uncharacterized protein pabp-2... 36 0.55
UniRef50_Q57YP5 Cluster: RNA-binding protein, putative; n=1; Try... 36 0.55
UniRef50_Q4UHB5 Cluster: RNA-binding protein, putative; n=2; The... 36 0.55
UniRef50_Q4PBV1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.55
UniRef50_Q09301 Cluster: Putative RNA-binding protein EEED8.12; ... 36 0.55
UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22; Endopt... 36 0.55
UniRef50_Q9BX46 Cluster: RNA-binding protein 24; n=52; Eumetazoa... 36 0.55
UniRef50_Q8WXF1 Cluster: Paraspeckle component 1; n=27; Euteleos... 36 0.55
UniRef50_Q06106 Cluster: Multiple RNA-binding domain-containing ... 36 0.55
UniRef50_UPI00015B552E Cluster: PREDICTED: similar to bruno; n=1... 36 0.72
UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA... 36 0.72
UniRef50_UPI000023E598 Cluster: hypothetical protein FG10156.1; ... 36 0.72
UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|R... 36 0.72
UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8... 36 0.72
UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1; Tre... 36 0.72
UniRef50_Q9SJT4 Cluster: Expressed protein; n=1; Arabidopsis tha... 36 0.72
UniRef50_Q9FFZ6 Cluster: Similarity to RNA-binding protein; n=2;... 36 0.72
UniRef50_Q7XGR3 Cluster: RNA recognition motif family protein, e... 36 0.72
UniRef50_Q2I310 Cluster: RNA recognition motif-containing protei... 36 0.72
UniRef50_Q018A5 Cluster: Putativ; n=2; Ostreococcus|Rep: Putativ... 36 0.72
UniRef50_O44530 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_A7RXI1 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.72
UniRef50_A7AWX7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD... 36 0.72
UniRef50_Q8IY53 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_A6RJZ8 Cluster: Putative uncharacterized protein; n=2; ... 36 0.72
UniRef50_Q8IUH3 Cluster: RNA-binding protein 45; n=27; Euteleost... 36 0.72
UniRef50_Q6CEW9 Cluster: Multiple RNA-binding domain-containing ... 36 0.72
UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep: LO... 36 0.96
UniRef50_Q9LU62 Cluster: Similarity to poly(A)-binding protein I... 36 0.96
UniRef50_Q0DZR5 Cluster: Os02g0602600 protein; n=3; Oryza sativa... 36 0.96
UniRef50_A7NUC5 Cluster: Chromosome chr18 scaffold_1, whole geno... 36 0.96
UniRef50_A3AAN7 Cluster: Putative uncharacterized protein; n=2; ... 36 0.96
UniRef50_Q9XU67 Cluster: Putative uncharacterized protein rbd-1;... 36 0.96
UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing... 36 0.96
UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n... 36 0.96
UniRef50_Q5CRV5 Cluster: SPAC25G10.01-like RRM domain containing... 36 0.96
UniRef50_Q5BW90 Cluster: SJCHGC05136 protein; n=1; Schistosoma j... 36 0.96
UniRef50_Q5BT94 Cluster: SJCHGC02233 protein; n=2; Bilateria|Rep... 36 0.96
UniRef50_Q5KP81 Cluster: Transformer-2-beta isoform 3, putative;... 36 0.96
UniRef50_Q5KBA9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.96
UniRef50_Q9H0Z9 Cluster: RNA-binding protein 38; n=16; Eutheria|... 36 0.96
UniRef50_Q86U42 Cluster: Polyadenylate-binding protein 2 (Poly(A... 36 0.96
UniRef50_O13620 Cluster: Multiple RNA-binding domain-containing ... 36 0.96
UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=7... 36 0.96
UniRef50_UPI00015B6013 Cluster: PREDICTED: similar to GA12086-PA... 35 1.3
UniRef50_Q3B6Q3 Cluster: RNA-binding region RNP-1; n=6; Chlorobi... 35 1.3
UniRef50_Q39SC4 Cluster: RNA-binding region RNP-1; n=2; Geobacte... 35 1.3
UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Re... 35 1.3
UniRef50_Q10RZ0 Cluster: RNA recognition motif family protein, e... 35 1.3
UniRef50_A2YWJ2 Cluster: Putative uncharacterized protein; n=3; ... 35 1.3
UniRef50_A7SM09 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ... 35 1.3
UniRef50_A7RLV0 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.3
UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia japon... 35 1.3
UniRef50_A2DHI9 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_A6NDY0 Cluster: Uncharacterized protein ENSP00000367609... 35 1.3
UniRef50_Q75EU7 Cluster: AAL018Wp; n=2; Eremothecium gossypii|Re... 35 1.3
UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation facto... 35 1.3
UniRef50_Q1DZF7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_A3LV94 Cluster: U4/U6 snRNA-associated splicing factor;... 35 1.3
UniRef50_Q7U7Q8 Cluster: PutativeRNA-binding protein RbpD; n=9; ... 35 1.7
UniRef50_Q48A10 Cluster: RNA-binding protein; n=2; Alteromonadal... 35 1.7
UniRef50_A0WC53 Cluster: RNA-binding region RNP-1; n=2; Desulfur... 35 1.7
UniRef50_Q9ZUJ3 Cluster: T2K10.5 protein; n=3; Magnoliophyta|Rep... 35 1.7
UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:... 35 1.7
UniRef50_A7P7U7 Cluster: Chromosome chr3 scaffold_8, whole genom... 35 1.7
UniRef50_A7NYH5 Cluster: Chromosome chr6 scaffold_3, whole genom... 35 1.7
UniRef50_A5BKF9 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q86EX2 Cluster: Clone ZZD1336 mRNA sequence; n=1; Schis... 35 1.7
UniRef50_Q5BYS2 Cluster: SJCHGC02231 protein; n=3; Schistosoma j... 35 1.7
UniRef50_Q1HE01 Cluster: Cbp20; n=6; Eukaryota|Rep: Cbp20 - Bomb... 35 1.7
UniRef50_A2EJG8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_A0DWV5 Cluster: Chromosome undetermined scaffold_67, wh... 35 1.7
UniRef50_Q76IQ0 Cluster: Putative uncharacterized protein SGN1; ... 35 1.7
UniRef50_Q75E07 Cluster: ABL134Cp; n=1; Eremothecium gossypii|Re... 35 1.7
UniRef50_Q5KPK3 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein... 35 1.7
UniRef50_A7TPL8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_A5E774 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q4PC17 Cluster: Multiple RNA-binding domain-containing ... 35 1.7
UniRef50_O04425 Cluster: Flowering time control protein FCA; n=1... 35 1.7
UniRef50_UPI0000E4A86C Cluster: PREDICTED: hypothetical protein,... 34 2.2
UniRef50_UPI0000E47201 Cluster: PREDICTED: similar to developmen... 34 2.2
UniRef50_UPI0000D9F579 Cluster: PREDICTED: similar to testes-spe... 34 2.2
UniRef50_UPI0000D5737C Cluster: PREDICTED: similar to RNA bindin... 34 2.2
UniRef50_UPI00005A4DCF Cluster: PREDICTED: similar to Heterogene... 34 2.2
UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1; ... 34 2.2
UniRef50_Q7MWI3 Cluster: RNA-binding protein; n=5; Bacteroidetes... 34 2.2
UniRef50_Q74DJ2 Cluster: RNA-binding protein; n=2; Geobacter|Rep... 34 2.2
UniRef50_A0HBM8 Cluster: RNA-binding region RNP-1; n=1; Comamona... 34 2.2
UniRef50_Q9FX45 Cluster: RNA-binding glycine-rich protein, putat... 34 2.2
UniRef50_Q8RWQ1 Cluster: At2g44720/F16B22.21; n=5; Magnoliophyta... 34 2.2
UniRef50_Q67XI5 Cluster: Putative uncharacterized protein At4g20... 34 2.2
UniRef50_Q5JJM4 Cluster: Peptidylprolyl cis-trans isomerase-like... 34 2.2
UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recogniti... 34 2.2
UniRef50_Q0D9E5 Cluster: Os06g0724600 protein; n=3; Oryza sativa... 34 2.2
UniRef50_A7PL41 Cluster: Chromosome chr7 scaffold_20, whole geno... 34 2.2
UniRef50_A3BFI4 Cluster: Putative uncharacterized protein; n=4; ... 34 2.2
UniRef50_Q7RIJ3 Cluster: RNA recognition motif, putative; n=3; P... 34 2.2
UniRef50_Q4QA46 Cluster: RNA-binding protein, putative, UPB1; n=... 34 2.2
UniRef50_A0BZZ4 Cluster: Chromosome undetermined scaffold_14, wh... 34 2.2
UniRef50_A5DYR4 Cluster: Putative uncharacterized protein; n=5; ... 34 2.2
UniRef50_Q7NCQ3 Cluster: RNA-binding protein; n=1; Gloeobacter v... 34 2.9
UniRef50_Q5ZYW0 Cluster: RNA binding protein, cold-inducible rrm... 34 2.9
UniRef50_Q1IV44 Cluster: RNA-binding protein, RNP-1; n=2; Bacter... 34 2.9
UniRef50_Q11SF1 Cluster: RNA binding protein; n=6; Bacteria|Rep:... 34 2.9
UniRef50_Q0EVV9 Cluster: RNA-binding protein; n=1; Mariprofundus... 34 2.9
UniRef50_A3XSE7 Cluster: RNA-binding protein; n=23; Gammaproteob... 34 2.9
UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidop... 34 2.9
UniRef50_Q762A1 Cluster: BRI1-KD interacting protein 113; n=4; O... 34 2.9
UniRef50_Q67W00 Cluster: Putative RRM-containing protein; n=2; O... 34 2.9
UniRef50_Q5K249 Cluster: Putative glycine-rich RNA-binding prote... 34 2.9
UniRef50_Q9XTZ2 Cluster: Putative uncharacterized protein rsp-8;... 34 2.9
UniRef50_A0BHN3 Cluster: Chromosome undetermined scaffold_108, w... 34 2.9
UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear ribonu... 34 2.9
UniRef50_Q7S0E6 Cluster: Putative uncharacterized protein NCU099... 34 2.9
UniRef50_Q6CC04 Cluster: Yarrowia lipolytica chromosome C of str... 34 2.9
UniRef50_O94290 Cluster: RNA-binding protein Cwf29; n=1; Schizos... 34 2.9
UniRef50_P19339 Cluster: Protein sex-lethal; n=41; Diptera|Rep: ... 34 2.9
UniRef50_UPI00015B5BCF Cluster: PREDICTED: similar to FTP3; n=1;... 33 3.9
UniRef50_UPI0000E45F82 Cluster: PREDICTED: hypothetical protein;... 33 3.9
UniRef50_Q6IRQ4 Cluster: MGC82187 protein; n=6; Tetrapoda|Rep: M... 33 3.9
UniRef50_Q4SI21 Cluster: Chromosome 5 SCAF14581, whole genome sh... 33 3.9
UniRef50_Q5E219 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_A1SSM5 Cluster: RNP-1 like RNA-binding protein precurso... 33 3.9
UniRef50_Q9SM01 Cluster: RNA binding protein; n=2; Arabidopsis t... 33 3.9
UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1; ... 33 3.9
UniRef50_A7QT53 Cluster: Chromosome undetermined scaffold_165, w... 33 3.9
UniRef50_A7P2N7 Cluster: Chromosome chr1 scaffold_5, whole genom... 33 3.9
UniRef50_A5BUJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_A5BPV3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q9W4X7 Cluster: CG8636-PA; n=8; Endopterygota|Rep: CG86... 33 3.9
UniRef50_Q5TWM9 Cluster: ENSANGP00000026178; n=2; Culicidae|Rep:... 33 3.9
UniRef50_Q5CFP8 Cluster: Poly(A) binding protein II; n=2; Crypto... 33 3.9
UniRef50_Q54GS2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q4QHE5 Cluster: Putative uncharacterized protein; n=3; ... 33 3.9
UniRef50_Q3HM26 Cluster: Sex-lethal isoform 1; n=4; Bombyx mori|... 33 3.9
UniRef50_Q245K5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_O45189 Cluster: Suppressor protein 12; n=2; Caenorhabdi... 33 3.9
UniRef50_A7RXA3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 33 3.9
UniRef50_A5K747 Cluster: RNA binding protein, putative; n=4; Pla... 33 3.9
UniRef50_A2EQG8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q7SGB3 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 33 3.9
UniRef50_Q7SFZ5 Cluster: Putative uncharacterized protein NCU030... 33 3.9
UniRef50_Q6FQ16 Cluster: Candida glabrata strain CBS138 chromoso... 33 3.9
UniRef50_A7F1A0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_O13741 Cluster: Nucleolar protein 12; n=1; Schizosaccha... 33 3.9
UniRef50_Q4WJT7 Cluster: Multiple RNA-binding domain-containing ... 33 3.9
UniRef50_Q19706 Cluster: Probable eukaryotic translation initiat... 33 3.9
UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein... 33 3.9
UniRef50_O14979 Cluster: Heterogeneous nuclear ribonucleoprotein... 33 3.9
UniRef50_UPI0000E4688E Cluster: PREDICTED: similar to La ribonuc... 33 5.1
UniRef50_UPI0000DB7056 Cluster: PREDICTED: similar to RNA bindin... 33 5.1
UniRef50_UPI0000DB6D53 Cluster: PREDICTED: similar to CG32169-PA... 33 5.1
UniRef50_UPI000065FE7B Cluster: RNA-binding protein 38 (RNA-bind... 33 5.1
UniRef50_Q8CGA7 Cluster: 3110045G13Rik protein; n=6; Euteleostom... 33 5.1
UniRef50_Q3JQ05 Cluster: Putative uncharacterized protein; n=3; ... 33 5.1
UniRef50_A4CFR2 Cluster: Putative uncharacterized protein; n=3; ... 33 5.1
UniRef50_A3J7P1 Cluster: RNA-binding protein; n=4; Gammaproteoba... 33 5.1
UniRef50_Q9UAF2 Cluster: Musashi; n=1; Halocynthia roretzi|Rep: ... 33 5.1
UniRef50_Q86ER1 Cluster: Clone ZZD1516 mRNA sequence; n=2; Schis... 33 5.1
UniRef50_Q4QAF2 Cluster: Putative uncharacterized protein; n=5; ... 33 5.1
UniRef50_Q4H2Q6 Cluster: Ci-Tardbp protein; n=1; Ciona intestina... 33 5.1
UniRef50_Q1JTC8 Cluster: Eukaryotic translation initiation facto... 33 5.1
UniRef50_Q18318 Cluster: Putative uncharacterized protein C30B5.... 33 5.1
UniRef50_A7ST95 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.1
UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.1
UniRef50_Q6CQW2 Cluster: Similarities with sp|Q8J1F4 Ashbya goss... 33 5.1
UniRef50_Q2HG12 Cluster: Putative uncharacterized protein; n=2; ... 33 5.1
UniRef50_Q0CUX4 Cluster: Predicted protein; n=1; Aspergillus ter... 33 5.1
UniRef50_A7TP27 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_A3LZT4 Cluster: Predicted protein; n=1; Pichia stipitis... 33 5.1
UniRef50_Q13148 Cluster: TAR DNA-binding protein 43; n=36; Coelo... 33 5.1
UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1; Schizosa... 33 5.1
UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein... 33 5.1
UniRef50_Q10572 Cluster: Sex determination protein fox-1; n=2; C... 33 5.1
UniRef50_Q16630 Cluster: Cleavage and polyadenylation specificit... 33 5.1
UniRef50_UPI0001555B84 Cluster: PREDICTED: similar to PP239 prot... 33 6.7
UniRef50_UPI00005A96C6 Cluster: PREDICTED: similar to Heterogene... 33 6.7
UniRef50_UPI0000515DAB Cluster: PREDICTED: similar to Polyadenyl... 33 6.7
UniRef50_Q83CD7 Cluster: Nucleic acid binding domain protein; n=... 33 6.7
UniRef50_O68279 Cluster: ArfII; n=2; Bacteria|Rep: ArfII - Cytop... 33 6.7
UniRef50_A6E971 Cluster: RNA binding protein; n=1; Pedobacter sp... 33 6.7
UniRef50_Q6YWP9 Cluster: RNA recognition motif (RRM)-containing ... 33 6.7
UniRef50_Q1ENZ5 Cluster: RNA-binding protein, putative; n=2; Mag... 33 6.7
UniRef50_A7Q8S8 Cluster: Chromosome chr5 scaffold_64, whole geno... 33 6.7
UniRef50_A3AB12 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A2X1B7 Cluster: Putative uncharacterized protein; n=2; ... 33 6.7
UniRef50_Q553V5 Cluster: Putative uncharacterized protein; n=4; ... 33 6.7
UniRef50_A0CBK1 Cluster: Chromosome undetermined scaffold_164, w... 33 6.7
UniRef50_Q9Y7Y3 Cluster: RNA-binding protein; n=1; Schizosacchar... 33 6.7
UniRef50_Q8SSA1 Cluster: NUCLEOLAR PROTEIN OF THE GAR FAMILY; n=... 33 6.7
UniRef50_Q5KP11 Cluster: Single-stranded DNA binding protein, pu... 33 6.7
UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A3M0M8 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 33 6.7
UniRef50_P40561 Cluster: RNA-binding protein SGN1; n=2; Saccharo... 33 6.7
UniRef50_P19683 Cluster: 31 kDa ribonucleoprotein, chloroplast p... 33 6.7
UniRef50_Q15717 Cluster: ELAV-like protein 1; n=28; Tetrapoda|Re... 33 6.7
UniRef50_UPI00015B48C0 Cluster: PREDICTED: similar to LOC443584 ... 32 8.9
UniRef50_UPI0000E4934F Cluster: PREDICTED: similar to musashi nr... 32 8.9
UniRef50_UPI0000D9F28C Cluster: PREDICTED: similar to poly(A)bin... 32 8.9
UniRef50_Q4QRG7 Cluster: Zgc:113884; n=5; Danio rerio|Rep: Zgc:1... 32 8.9
UniRef50_Q6VYI5 Cluster: TARDBP S8; n=8; Coelomata|Rep: TARDBP S... 32 8.9
UniRef50_Q05C33 Cluster: Tardbp protein; n=14; Coelomata|Rep: Ta... 32 8.9
UniRef50_Q8DIW2 Cluster: Tlr1469 protein; n=1; Synechococcus elo... 32 8.9
UniRef50_Q2AH97 Cluster: Permease YjgP/YjgQ; n=1; Halothermothri... 32 8.9
UniRef50_Q9XFD1 Cluster: Nuclear cap-binding protein; n=16; Euka... 32 8.9
UniRef50_Q9LNP1 Cluster: F1L3.34; n=2; Arabidopsis thaliana|Rep:... 32 8.9
UniRef50_Q9LIH1 Cluster: Genomic DNA, chromosome 3, P1 clone:MFD... 32 8.9
UniRef50_Q9FVQ1 Cluster: NuM1 protein, putative; n=2; Arabidopsi... 32 8.9
UniRef50_Q531A8 Cluster: FCA gamma; n=1; Pisum sativum|Rep: FCA ... 32 8.9
UniRef50_Q014L5 Cluster: Cyclophilin-type peptidyl-prolyl cis-tr... 32 8.9
UniRef50_A7QLH7 Cluster: Chromosome undetermined scaffold_119, w... 32 8.9
UniRef50_A7PXT7 Cluster: Chromosome chr15 scaffold_37, whole gen... 32 8.9
UniRef50_A7PCC5 Cluster: Chromosome chr2 scaffold_11, whole geno... 32 8.9
UniRef50_A5BIG2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q9VDI8 Cluster: CG17838-PD, isoform D; n=11; Endopteryg... 32 8.9
UniRef50_Q6UDW5 Cluster: Erythrocyte membrane protein 1; n=5; Pl... 32 8.9
UniRef50_Q6J288 Cluster: Mannose-binding protein; n=1; Acanthamo... 32 8.9
UniRef50_Q5TVV0 Cluster: ENSANGP00000028861; n=2; Culicidae|Rep:... 32 8.9
UniRef50_Q5CHR5 Cluster: Nuclear cap-binding protein; n=3; Crypt... 32 8.9
UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1; Try... 32 8.9
UniRef50_Q54CU3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 32 8.9
UniRef50_Q4N8H4 Cluster: RNA-binding protein, putative; n=2; The... 32 8.9
UniRef50_Q23RL2 Cluster: Nucleolar phosphoprotein, putative; n=2... 32 8.9
UniRef50_A7T0E1 Cluster: Predicted protein; n=4; Nematostella ve... 32 8.9
UniRef50_Q6C1T7 Cluster: Similar to DEHA0A13563g Debaryomyces ha... 32 8.9
UniRef50_Q6BMT1 Cluster: Similar to CA5935|IPF2798 Candida albic... 32 8.9
UniRef50_Q5KIS6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q0UE30 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_A7ELW8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_A6SJV1 Cluster: Putative uncharacterized protein; n=2; ... 32 8.9
UniRef50_Q14498 Cluster: RNA-binding protein 39; n=55; Euteleost... 32 8.9
>UniRef50_Q06477 Cluster: IFN-response element binding factor 2;
n=3; Murinae|Rep: IFN-response element binding factor 2
- Mus musculus (Mouse)
Length = 277
Score = 143 bits (346), Expect = 3e-33
Identities = 67/107 (62%), Positives = 78/107 (72%)
Frame = +1
Query: 82 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS* 261
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ESRGFAS
Sbjct: 47 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFASS 106
Query: 262 GFSSVVTLKKPWTRWTDECWTAGNFAFRWRDMVAPHRHTGVVTIAGA 402
G ++ T K PWT WT C TA ++ RWR A T T AGA
Sbjct: 107 GSTTSATPKTPWTPWTGRCSTAASYGCRWRATAARPTRT---TAAGA 150
>UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-length
enriched library, clone:4833401I21 product:splicing
factor, arginine/serine-rich 2 (SC- 35), full insert
sequence; n=7; Mammalia|Rep: 0 day neonate head cDNA,
RIKEN full-length enriched library, clone:4833401I21
product:splicing factor, arginine/serine-rich 2 (SC-
35), full insert sequence - Mus musculus (Mouse)
Length = 254
Score = 107 bits (258), Expect = 1e-22
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +1
Query: 82 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ESRGFA
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFA 58
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +3
Query: 279 DAEEALDTMDGRMLDGRELRVQMA 350
DAE+A+D MDG +LDGRELRVQMA
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMA 90
>UniRef50_Q6NXQ0 Cluster: SFRS2 protein; n=4; Homo/Pan/Gorilla
group|Rep: SFRS2 protein - Homo sapiens (Human)
Length = 179
Score = 107 bits (258), Expect = 1e-22
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +1
Query: 82 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ESRGFA
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFA 58
>UniRef50_Q9BRL6 Cluster: Splicing factor, arginine/serine-rich 2B;
n=41; Eumetazoa|Rep: Splicing factor,
arginine/serine-rich 2B - Homo sapiens (Human)
Length = 282
Score = 95.5 bits (227), Expect = 8e-19
Identities = 40/58 (68%), Positives = 50/58 (86%)
Frame = +1
Query: 82 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+ +T+ RGFA
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 279 DAEEALDTMDGRMLDGRELRVQMA 350
DA++A MDG LDGRELRVQ+A
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVA 90
>UniRef50_Q09511 Cluster: Probable splicing factor,
arginine/serine-rich 4; n=10; Bilateria|Rep: Probable
splicing factor, arginine/serine-rich 4 - Caenorhabditis
elegans
Length = 196
Score = 83.8 bits (198), Expect = 3e-15
Identities = 33/53 (62%), Positives = 46/53 (86%)
Frame = +1
Query: 94 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
R P I+G+ SLK+DNL+Y+TTP DLRR FER G++GD++IPRD+Y+R+S+GF
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGF 62
Score = 37.9 bits (84), Expect = 0.18
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 279 DAEEALDTMDGRMLDGRELRVQMA 350
DAE ALD DG+++DGRELRV +A
Sbjct: 72 DAEHALDRTDGKLVDGRELRVTLA 95
>UniRef50_UPI00005C16F5 Cluster: PREDICTED: similar to Sfrs2-prov
protein; n=4; Bos taurus|Rep: PREDICTED: similar to
Sfrs2-prov protein - Bos taurus
Length = 194
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 82 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
M+Y RPPP + ++SLKVDNLT + LR +FE+ G + D+YI RDR+T+ESR FA
Sbjct: 1 MNYSRPPPNVGDLISLKVDNLTDPISHSTLRCIFEKYGPISDVYILRDRFTQESRDFA 58
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 282 AEEALDTMDGRMLDGRELRVQMA 350
AEEA+D +DG MLDG L+VQMA
Sbjct: 68 AEEAMDALDGVMLDGHVLQVQMA 90
>UniRef50_Q018R2 Cluster: RSP4_CAEEL Probable splicing factor,
arginine/serine-rich 4; n=1; Ostreococcus tauri|Rep:
RSP4_CAEEL Probable splicing factor,
arginine/serine-rich 4 - Ostreococcus tauri
Length = 100
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 94 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
R P ++ +VS+K+DNL+Y EDLR F R GE+GD+Y+P DR TR RGF
Sbjct: 43 RERPDVNDLVSVKIDNLSYDAREEDLREAFSRYGEIGDVYVPLDRETRRPRGF 95
>UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 98
Score = 64.1 bits (149), Expect = 2e-09
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +1
Query: 103 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
P I +VS+K+DN++Y EDLR FE+ G+VGD+YIP++R + +RGFA
Sbjct: 1 PDISNLVSVKIDNVSYELREEDLREAFEKFGDVGDVYIPKERGSYRARGFA 51
>UniRef50_A7QII5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=11; Magnoliophyta|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 284
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 88 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+GR PP I SL V N+T+RTT +DL F++ G+V DI+IPRDR T ESRGFA
Sbjct: 4 FGRSGPPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFA 60
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +3
Query: 279 DAEEALDTMDGRMLDGRELRVQMA 350
+A++A+D +DGR++DGRE+ VQ A
Sbjct: 69 EAQKAVDRLDGRIVDGREITVQFA 92
>UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6;
Magnoliophyta|Rep: Similarity to splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 303
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 88 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+GR PP I SL V N+T+RTT +DL +F + G+V D++IPRDR T +SRGFA
Sbjct: 4 FGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Score = 32.3 bits (70), Expect = 8.9
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3
Query: 279 DAEEALDTMDGRMLDGRELRVQMA 350
+A +A++ +DGR++DGRE+ VQ A
Sbjct: 69 EAHKAVERLDGRVVDGREITVQFA 92
>UniRef50_UPI0000DBF0C6 Cluster: UPI0000DBF0C6 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF0C6 UniRef100 entry -
Rattus norvegicus
Length = 197
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +1
Query: 109 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+DGM LKV+NL Y T+ L+ +FE G VGD+++PR+ T E+ GFA
Sbjct: 10 VDGMTCLKVENLAYHTSSYTLKLIFEDYGAVGDVFVPRNHLTEENYGFA 58
>UniRef50_A2APT2 Cluster: Novel protein; n=3; Murinae|Rep: Novel
protein - Mus musculus (Mouse)
Length = 829
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 109 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+DGM LKV+NL + T+ L+ VFE G +GD+YIPR+ T E GFA
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRNHLTEEHYGFA 58
>UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 914
Score = 57.2 bits (132), Expect = 3e-07
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = +1
Query: 109 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+D S+ + NL Y T+P+ +R++FE G+V D+Y+P D YTR+ RGF
Sbjct: 2 VDSGCSILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRKPRGF 49
>UniRef50_A7ARN5 Cluster: Ser/Arg-rich splicing factor, putative;
n=1; Babesia bovis|Rep: Ser/Arg-rich splicing factor,
putative - Babesia bovis
Length = 188
Score = 56.0 bits (129), Expect = 6e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
SL V NL Y T+P+ LR F R GE+ D+Y+P D YTR+ RGF
Sbjct: 13 SLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGF 55
>UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium
(Vinckeia)|Rep: Dentin phosphoryn - Plasmodium yoelii
yoelii
Length = 793
Score = 54.8 bits (126), Expect = 1e-06
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +1
Query: 109 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
++ SL + NL++ T+P+ +R++FE G++ D+Y+P D YTR RGF
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGF 49
>UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1057
Score = 54.8 bits (126), Expect = 1e-06
Identities = 20/48 (41%), Positives = 33/48 (68%)
Frame = +1
Query: 109 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
++ SL + NL++ T+PE +R++F+ G + D+Y+P D YTR RGF
Sbjct: 2 VENGCSLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLDHYTRRPRGF 49
>UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18;
Euteleostomi|Rep: 35 kDa SR repressor protein - Homo
sapiens (Human)
Length = 261
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/63 (49%), Positives = 35/63 (55%)
Frame = +1
Query: 88 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GF 267
Y RPP SL + N+ T PEDLRR F R G + D+YIP D YTR RGFA F
Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
Query: 268 SSV 276
V
Sbjct: 59 EDV 61
>UniRef50_UPI0000D55448 Cluster: PREDICTED: similar to Splicing
factor, arginine/serine-rich 2 (Splicing factor SC35)
(SC-35) (Splicing component, 35 kDa); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Splicing factor,
arginine/serine-rich 2 (Splicing factor SC35) (SC-35)
(Splicing component, 35 kDa) - Tribolium castaneum
Length = 231
Score = 53.2 bits (122), Expect = 4e-06
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
++K+ NL Y+ EDL+++F G + DIY+PR RYT +RGFA
Sbjct: 132 TVKITNLNYKIDEEDLKKIFSGIGPIADIYVPRLRYTHLNRGFA 175
Score = 33.1 bits (72), Expect = 5.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 249
++V NL + TT L+ F CG+V + I R+ T SRG
Sbjct: 25 VRVANLDFGTTEATLKSFFSSCGDVHECVISRNIDTNTSRG 65
>UniRef50_Q9FYA9 Cluster: SC35-like splicing factor SCL30, 30 kD;
n=10; Magnoliophyta|Rep: SC35-like splicing factor
SCL30, 30 kD - Arabidopsis thaliana (Mouse-ear cress)
Length = 262
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
SL V N+ PE+LR FER G V D+YIPRD Y+ + RGFA
Sbjct: 48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFA 91
>UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22;
Eukaryota|Rep: Serine/arginine-rich protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 287
Score = 50.0 bits (114), Expect = 4e-05
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
SL V NL + EDLR+ FE+ G V DIY+PRD YT + RGF
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGF 79
>UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich
protein 1; n=55; Tetrapoda|Rep: FUS-interacting
serine-arginine-rich protein 1 - Homo sapiens (Human)
Length = 262
Score = 50.0 bits (114), Expect = 4e-05
Identities = 30/63 (47%), Positives = 34/63 (53%)
Frame = +1
Query: 88 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GF 267
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR RGFA F
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
Query: 268 SSV 276
V
Sbjct: 59 EDV 61
>UniRef50_Q5CF61 Cluster: Dentin phosphoryn; n=2;
Cryptosporidium|Rep: Dentin phosphoryn - Cryptosporidium
hominis
Length = 286
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
SL V NL + T+P +R FER G V D+Y+P D YTR RGF
Sbjct: 91 SLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGF 133
>UniRef50_Q2QNB0 Cluster: RNA recognition motif family protein,
expressed; n=3; Magnoliophyta|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 263
Score = 49.2 bits (112), Expect = 7e-05
Identities = 29/62 (46%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Frame = +1
Query: 91 GRPPPRI-------DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 249
GR PPR G SL V N+ EDLR FER G V D+Y+P+D Y+ E RG
Sbjct: 20 GRSPPRRGYGGRREQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRG 79
Query: 250 FA 255
FA
Sbjct: 80 FA 81
>UniRef50_Q1PDV2 Cluster: 28 kDa SC35-like splicing factor; n=9;
Magnoliophyta|Rep: 28 kDa SC35-like splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 236
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +1
Query: 115 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
G L + NL P DLR FER G + DIY+PR+ YT E RGF
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGF 90
>UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1
protein, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to FUSIP1 protein, partial -
Ornithorhynchus anatinus
Length = 224
Score = 46.8 bits (106), Expect = 4e-04
Identities = 28/62 (45%), Positives = 32/62 (51%)
Frame = +1
Query: 91 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
G P P ID SL+ EDLRR F R G + D+Y+P D YTR RGFA F
Sbjct: 82 GDPGP-IDDAGSLRCVPAFVLERSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 140
Query: 271 SV 276
V
Sbjct: 141 DV 142
>UniRef50_Q9P4V6 Cluster: RNA-binding protein; n=3;
Saccharomycetales|Rep: RNA-binding protein - Candida
boidinii (Yeast)
Length = 255
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
S+ + NL Y TP++L++ FE CG + I IP +++T +GFA FS
Sbjct: 125 SVYIGNLDYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEFS 173
>UniRef50_Q8MYR4 Cluster: SD14970p; n=2; Drosophila
melanogaster|Rep: SD14970p - Drosophila melanogaster
(Fruit fly)
Length = 918
Score = 46.4 bits (105), Expect = 5e-04
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS 258
NL Y TT EDLR++FE+ G V ++ +P D+ TR+ +GF +
Sbjct: 370 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGT 409
>UniRef50_Q8DIY8 Cluster: RNA binding protein; n=3;
Cyanobacteria|Rep: RNA binding protein - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 90
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
++L + NL+Y T DLR VFE+ G + I +P DR T + RGFA
Sbjct: 1 MTLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFA 45
>UniRef50_A5KAW4 Cluster: Ser/Arg-rich splicing factor, putative;
n=6; Plasmodium|Rep: Ser/Arg-rich splicing factor,
putative - Plasmodium vivax
Length = 328
Score = 46.0 bits (104), Expect = 7e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+SL + L Y T+P +R F++ G + D+Y+P D YT+E RGF
Sbjct: 12 MSLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGF 55
>UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 294
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
D ++L+V NL+ T +DLRR+F + G + +Y+ +DR T RGFA
Sbjct: 211 DDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFA 258
>UniRef50_UPI0000DB7622 Cluster: PREDICTED: similar to CG3335-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG3335-PA
- Apis mellifera
Length = 816
Score = 45.6 bits (103), Expect = 9e-04
Identities = 17/42 (40%), Positives = 31/42 (73%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS 258
+ NL+Y TT +D+R++FE+ G + ++ +P DR TR+ +GF +
Sbjct: 306 IRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKLKGFGT 347
>UniRef50_UPI0000498562 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 135
Score = 45.6 bits (103), Expect = 9e-04
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
S+ V N+ Y TT E+L +FERCG V + IP +++T+ + G+A+ F + ++K
Sbjct: 40 SVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQFTQTTMGYANIEFKNSNAVEK 95
>UniRef50_UPI0000D997C2 Cluster: PREDICTED: similar to FUS
interacting protein (serine-arginine rich) 1; n=1;
Macaca mulatta|Rep: PREDICTED: similar to FUS
interacting protein (serine-arginine rich) 1 - Macaca
mulatta
Length = 465
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSV 276
EDLRR F R G + D+Y+P D YTR RGFA F V
Sbjct: 392 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDV 429
>UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep:
CG32169-PA - Drosophila melanogaster (Fruit fly)
Length = 369
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKKPWTRWTD 312
+ L+++T+PE LR F R G++ + + +D TR SRGF FS ++ K T+ T
Sbjct: 33 IGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTH 92
Query: 313 E 315
E
Sbjct: 93 E 93
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 100 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
P + + V L+ TT ED++ FE+ G + D + D+ T RGF F S
Sbjct: 111 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQS 168
>UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1;
Nitrosococcus oceani ATCC 19707|Rep: RNA-binding
protein, RNP-1 - Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848)
Length = 119
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 118 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+V++ V NL+Y+ T EDLR FE GEV + D+++ S+GF
Sbjct: 17 IVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGF 61
>UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1;
Opitutaceae bacterium TAV2|Rep: RNP-1 like RNA-binding
protein - Opitutaceae bacterium TAV2
Length = 106
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L V NL++ T+ DLR F CG + D+++ DR T RGFA
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFA 47
>UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative;
n=1; Plasmodium falciparum 3D7|Rep: Nucleic acid binding
factor, putative - Plasmodium falciparum (isolate 3D7)
Length = 580
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L V L TT E LR FE+ GE+ DIY+P D YT RG A
Sbjct: 504 LFVTKLNSATTIEKLRNYFEKFGEIIDIYMPNDVYTNRPRGIA 546
Score = 32.7 bits (71), Expect = 6.7
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 142 LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
L + + +DL + F + G++ DIY+ R+ +++GF F ++ K
Sbjct: 233 LPFEASKKDLEKYFSKFGKIVDIYVSRNISNNKNKGFGFVSFEKQESMNK 282
>UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protein;
n=2; Arabidopsis thaliana|Rep: RNA recognition
motif-containing protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 317
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVT 282
V NLT+RTT +DLRR FE+ G+V D + + Y S+G+ F V+
Sbjct: 16 VGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITFRDYVS 65
>UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
annulata
Length = 245
Score = 43.6 bits (98), Expect = 0.004
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
NL + T+P+ +R FE+ G++ D+Y+P D TR RGF
Sbjct: 13 NLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGF 50
>UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 895
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
V NL+Y T EDL +VF + G++ +I+IP D +++S+G A
Sbjct: 365 VRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIA 405
>UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10;
Bacteria|Rep: Putative RNA-binding protein rbpF -
Anabaena sp. (strain PCC 7120)
Length = 105
Score = 42.7 bits (96), Expect = 0.006
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+S+ V NL+Y T ED+ VF G V + +P DR T RGFA
Sbjct: 1 MSIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFA 45
>UniRef50_O75821 Cluster: Eukaryotic translation initiation factor 3
subunit 4; n=36; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 4 - Homo sapiens (Human)
Length = 320
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 94 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+P R D +++V NL+ T DL+ +F G + IY+ +D+ T +S+GFA
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFA 283
>UniRef50_UPI00015560CE Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein A1; n=4; Mammalia|Rep:
PREDICTED: similar to heterogeneous nuclear
ribonucleoprotein A1 - Ornithorhynchus anatinus
Length = 280
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +1
Query: 82 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS* 261
MS P + + L + L++ TT E LR FE+ G + D + RD T+ SRGF
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGF--- 57
Query: 262 GFSSVVTLKK 291
GF + T+++
Sbjct: 58 GFVTYATVEE 67
>UniRef50_P09651 Cluster: Heterogeneous nuclear ribonucleoprotein
A1; n=390; Euteleostomi|Rep: Heterogeneous nuclear
ribonucleoprotein A1 - Homo sapiens (Human)
Length = 372
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +1
Query: 82 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS* 261
MS P + + L + L++ TT E LR FE+ G + D + RD T+ SRGF
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGF--- 57
Query: 262 GFSSVVTLKK 291
GF + T+++
Sbjct: 58 GFVTYATVEE 67
>UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 588
Score = 41.9 bits (94), Expect = 0.011
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+ L + TT + LRR F + GEVG+ I RD T SRGFA
Sbjct: 173 IGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGRSRGFA 213
>UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 361
Score = 41.9 bits (94), Expect = 0.011
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSV 276
L + N+ Y TT +L R+F+ G V D+ + DR T RGFA F SV
Sbjct: 233 LFIGNIPYETTDAELNRIFQGMGNVKDVRVAVDRTTGWPRGFAHADFPSV 282
>UniRef50_Q2GTP8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 250
Score = 41.9 bits (94), Expect = 0.011
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
S+ V N+ Y T+PE+L+ F+ CG + + I D++T + +G+A FS
Sbjct: 128 SIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFS 176
>UniRef50_P62995 Cluster: Splicing factor, arginine/serine-rich 10;
n=30; Bilateria|Rep: Splicing factor,
arginine/serine-rich 10 - Homo sapiens (Human)
Length = 288
Score = 41.9 bits (94), Expect = 0.011
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
L V L+ TT DLR VF + G + D+ I D+ +R SRGFA F +V K+
Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKE 174
>UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 221
Score = 41.5 bits (93), Expect = 0.015
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +1
Query: 97 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSV 276
PPP+ D +L + L+ RTT + L+ F + GEV + DR T S+GF +++V
Sbjct: 28 PPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATV 87
>UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2;
Theileria|Rep: RNA-binding (SR) protein, putative -
Theileria annulata
Length = 303
Score = 41.5 bits (93), Expect = 0.015
Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 124 SLKV--DNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
SLK+ LT TTPEDL+ F + GEV I RD+ T SRGF
Sbjct: 27 SLKIFAGGLTRSTTPEDLKEYFSKYGEVTHTEIVRDKNTGRSRGF 71
>UniRef50_Q24847 Cluster: Surface antigen protein; n=3; Entamoeba
histolytica|Rep: Surface antigen protein - Entamoeba
histolytica
Length = 294
Score = 41.5 bits (93), Expect = 0.015
Identities = 14/40 (35%), Positives = 28/40 (70%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+ NL + T ++ R+ F+R G + +I++P D+ T++S+GF
Sbjct: 190 ITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKKSKGF 229
>UniRef50_P51991 Cluster: Heterogeneous nuclear ribonucleoprotein
A3; n=98; Coelomata|Rep: Heterogeneous nuclear
ribonucleoprotein A3 - Homo sapiens (Human)
Length = 378
Score = 41.5 bits (93), Expect = 0.015
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +1
Query: 91 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
G P + + L + L++ TT + LR FE+ G + D + RD T+ SRGF +S
Sbjct: 25 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYS 84
Query: 271 SV 276
V
Sbjct: 85 CV 86
>UniRef50_A7P058 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 272
Score = 41.1 bits (92), Expect = 0.019
Identities = 23/49 (46%), Positives = 27/49 (55%)
Frame = +1
Query: 88 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 234
YG D SL V NL + EDLRR F + G + DIY+PRD YT
Sbjct: 27 YGGRGSARDLPTSLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYT 75
>UniRef50_Q6X9Z2 Cluster: HnRNP core protein A1; n=2;
Laurasiatheria|Rep: HnRNP core protein A1 - Equus
caballus (Horse)
Length = 61
Score = 41.1 bits (92), Expect = 0.019
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 82 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
MS P + + L + L++ TT E LR FE+ G + D + RD T+ SRGF
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGF 57
>UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3;
Endopterygota|Rep: ENSANGP00000026814 - Anopheles
gambiae str. PEST
Length = 358
Score = 41.1 bits (92), Expect = 0.019
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L + L YRTT + L+ FE+ G+V D+ + +D T+ SRGF
Sbjct: 29 LFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGF 70
>UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative;
n=2; Theileria|Rep: Nucleic acid binding factor,
putative - Theileria parva
Length = 421
Score = 41.1 bits (92), Expect = 0.019
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L V + + T+ LR F + GEV D+YIP+D +T++ +GF
Sbjct: 340 LFVGRIAFETSVHSLRTYFSQFGEVIDVYIPKDPHTQKGKGF 381
Score = 32.3 bits (70), Expect = 8.9
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPR-DRYTRESRGFAS*GFSSVVTLKK 291
+ + + T +DL F++ G V D Y PR + Y+ ++GF F + +++K
Sbjct: 122 ITRIAFEATKDDLEDYFKKFGTVYDAYCPRQNNYSGLNKGFGFISFENEDSIRK 175
>UniRef50_A1DGG0 Cluster: Small subunit of nuclear cap-binding
protein complex; n=8; Pezizomycotina|Rep: Small subunit
of nuclear cap-binding protein complex - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 196
Score = 41.1 bits (92), Expect = 0.019
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 97 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
P ++ +L V NL++ TT E + +F +CGE+ + + DRY + GF
Sbjct: 59 PVDKLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRYNKTPCGF 110
>UniRef50_UPI00015B5DA3 Cluster: PREDICTED: similar to CG3335-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG3335-PA - Nasonia vitripennis
Length = 909
Score = 40.7 bits (91), Expect = 0.025
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS 258
NL+Y T +D+R++FE G + ++ +P D TR+ +GF +
Sbjct: 365 NLSYTATEDDIRKLFETYGPLSEVNLPIDMVTRKPKGFGT 404
>UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;
n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 163
Score = 40.7 bits (91), Expect = 0.025
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
S+ V N+ Y T ++L F CG V + IP +R+T +GFA FS
Sbjct: 38 SIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFS 86
>UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;
Magnoliophyta|Rep: Similarity to RNA-binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 156
Score = 40.7 bits (91), Expect = 0.025
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +1
Query: 103 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVT 282
P+ + +L V L+ RTT E LR F + GEV D + DR + S+GF GF T
Sbjct: 50 PQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGF---GFVRYAT 106
Query: 283 LK 288
L+
Sbjct: 107 LE 108
>UniRef50_Q6ID29 Cluster: At4g13860; n=9; cellular organisms|Rep:
At4g13860 - Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 40.7 bits (91), Expect = 0.025
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
V NL+ TT + LR F G V D + RDRYT SRGF +SS
Sbjct: 7 VGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSS 53
>UniRef50_A4RWB3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 92
Score = 40.7 bits (91), Expect = 0.025
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
VS+ V N+++ +D+R F+ G V D+Y+P+DR T RG A
Sbjct: 1 VSVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLA 45
>UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06618 protein - Schistosoma
japonicum (Blood fluke)
Length = 281
Score = 40.7 bits (91), Expect = 0.025
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLK 288
+++V NL TT +DL+ +F G V IY +D+ T+++RGFA F ++ K
Sbjct: 201 TVRVTNLAPDTTVDDLKAMFSAFGHVMRIYPAKDKLTQQNRGFAFISFKTLEEAK 255
>UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein,
putative; n=2; Aspergillus|Rep: Glycine-rich RNA-binding
protein, putative - Aspergillus clavatus
Length = 133
Score = 40.7 bits (91), Expect = 0.025
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 118 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
M L + L + TT + LR+ FE+ G+V + + +DR T SRGF FSS
Sbjct: 1 MSKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSS 52
>UniRef50_Q9Y4C8 Cluster: Probable RNA-binding protein 19; n=30;
Deuterostomia|Rep: Probable RNA-binding protein 19 -
Homo sapiens (Human)
Length = 960
Score = 40.7 bits (91), Expect = 0.025
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L V NL Y +T EDL ++F + G + +++ P D T++ +GFA
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFA 446
>UniRef50_O14327 Cluster: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II); n=22; Eukaryota|Rep: Polyadenylate-binding protein
2 (Poly(A)-binding protein 2) (Poly(A)- binding protein
II) - Schizosaccharomyces pombe (Fission yeast)
Length = 166
Score = 40.7 bits (91), Expect = 0.025
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
S+ V N+ Y TPE+L+ F CG V + I D++T +GFA FS
Sbjct: 56 SVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFS 104
>UniRef50_P78795 Cluster: Probable eukaryotic translation initiation
factor 3 RNA-binding subunit; n=1; Schizosaccharomyces
pombe|Rep: Probable eukaryotic translation initiation
factor 3 RNA-binding subunit - Schizosaccharomyces pombe
(Fission yeast)
Length = 282
Score = 40.7 bits (91), Expect = 0.025
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
D +L+V NL+ T E+LR +F R G + +Y+ +D+ T ++GFA
Sbjct: 199 DDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFA 246
>UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
LOC561459 protein - Danio rerio
Length = 329
Score = 40.3 bits (90), Expect = 0.034
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
D + L V L + TT E LR F + GEV D I +D+ T +SRGF
Sbjct: 20 DEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGF 66
>UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome
shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 7
SCAF14703, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 157
Score = 40.3 bits (90), Expect = 0.034
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
+ L+++T+P+ LR F + GE+ + + RD T+ SRGF F+ ++ K
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDK 77
>UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:
RNA-binding protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 95
Score = 40.3 bits (90), Expect = 0.034
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 109 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+DGM + V NL+YR T ++L VF + G+V + I DR T +S+GF
Sbjct: 1 MDGM-KIYVGNLSYRMTADELTTVFSQFGQVDKVDIIIDRDTGQSKGF 47
>UniRef50_A5JZY0 Cluster: RNA binding protein, putative; n=2;
Eukaryota|Rep: RNA binding protein, putative - Plasmodium
vivax
Length = 1127
Score = 40.3 bits (90), Expect = 0.034
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
L V NL ++ T E+LR++F G + + IP++ Y R SRG+A F S
Sbjct: 988 LLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNR-SRGYAFVEFMS 1035
>UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 308
Score = 40.3 bits (90), Expect = 0.034
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
D + +L+V NL+ +DLR +F R G V +Y+ RDR T +G+A F +
Sbjct: 222 DDLPTLRVTNLSEDADDDDLRELFMRFGRVVRVYVGRDRETGICKGYAFVSFEN 275
>UniRef50_Q2UQ21 Cluster: Predicted protein; n=3;
Pezizomycotina|Rep: Predicted protein - Aspergillus
oryzae
Length = 127
Score = 40.3 bits (90), Expect = 0.034
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 118 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
M L + L + TT E LR FE+ G V + + +DR T SRGF FSS
Sbjct: 1 MSKLFIGGLAWHTTDESLRSGFEKYGAVEEAIVVKDRDTGRSRGFGFVRFSS 52
>UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2;
cellular organisms|Rep: RNP-1 like RNA-binding protein -
Solibacter usitatus (strain Ellin6076)
Length = 132
Score = 39.9 bits (89), Expect = 0.044
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 118 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
M ++ V NL + + E +R +FER G+V I DR T SRGFA
Sbjct: 1 MKNIFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFA 46
>UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP1;
n=3; Arabidopsis thaliana|Rep:
Phragmoplastin-interacting protein PHIP1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 597
Score = 39.9 bits (89), Expect = 0.044
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 79 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS 258
K S G P +DG + + NL + TT D+R++F C + + + +++ T E +G+A
Sbjct: 248 KTSSGFAPEMVDGYNRVYIGNLAWDTTERDIRKLFSDC-VINSVRLGKNKETGEFKGYAH 306
Query: 259 *GFSSVV 279
F V
Sbjct: 307 VDFKDSV 313
>UniRef50_A4RUB8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 319
Score = 39.9 bits (89), Expect = 0.044
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+L V N++ R LRR+FE CGEV + RD T +SRGF
Sbjct: 21 NLYVKNISERVDELTLRRLFEACGEVQSCCVIRDVSTNKSRGF 63
>UniRef50_Q9VZE4 Cluster: CG1316-PA; n=5; Diptera|Rep: CG1316-PA -
Drosophila melanogaster (Fruit fly)
Length = 470
Score = 39.9 bits (89), Expect = 0.044
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKKPWTRWTDECWTAGNF 336
T ED R F GE+ DI++ +D++T+E++G A FS K + T G
Sbjct: 39 TEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEEMNGK--TIGKM 96
Query: 337 AFRWRDMVAPHRHTG 381
+ +VA +R+ G
Sbjct: 97 DRTLKVLVAANRNQG 111
>UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1;
Tetrahymena thermophila SB210|Rep: Polyadenylate-binding
protein 2 - Tetrahymena thermophila SB210
Length = 180
Score = 39.9 bits (89), Expect = 0.044
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
S+ V N+ Y TT E+L +F+ CGE+ I IP+ R + +GFA
Sbjct: 60 SIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTR-QGQGKGFA 102
>UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39;
Euteleostomi|Rep: DAZ-associated protein 1 - Homo
sapiens (Human)
Length = 407
Score = 39.9 bits (89), Expect = 0.044
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
D + L V L + TT E LR F + GEV D I +D+ T +SRGF
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGF 53
>UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 476
Score = 39.5 bits (88), Expect = 0.059
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L V L + TT E LR F + GEV D I +D+ T +SRGF
Sbjct: 2 LFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGF 43
>UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN
full-length enriched library, clone:6030413L18
product:Musashi homolog 2 (Drosophila), full insert
sequence; n=3; Deuterostomia|Rep: 13 days embryo male
testis cDNA, RIKEN full-length enriched library,
clone:6030413L18 product:Musashi homolog 2 (Drosophila),
full insert sequence - Mus musculus (Mouse)
Length = 192
Score = 39.5 bits (88), Expect = 0.059
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
+ L+++T+P+ LR F + GE+ + + RD T+ SRGF F+ ++ K
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDPASVDK 77
>UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h
protein - Mus musculus (Mouse)
Length = 193
Score = 39.5 bits (88), Expect = 0.059
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
+ L+++T+P+ LR F + GE+ + + RD T+ SRGF F+ ++ K
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
>UniRef50_P73557 Cluster: RNA-binding protein; n=2;
Chroococcales|Rep: RNA-binding protein - Synechocystis
sp. (strain PCC 6803)
Length = 83
Score = 39.5 bits (88), Expect = 0.059
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+S+ V NL+Y+ T +D+ VF G V + +P DR T RGF
Sbjct: 1 MSIYVGNLSYQATEDDVLTVFSEYGTVKRVQLPTDRETGRMRGF 44
>UniRef50_A7PHW6 Cluster: Chromosome chr13 scaffold_17, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr13 scaffold_17, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 39.5 bits (88), Expect = 0.059
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
V NL Y T DL +F G+V + I +DR+TR SRG A
Sbjct: 118 VSNLDYTLTNSDLFTIFSTFGKVAKVTILKDRHTRHSRGVA 158
>UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 288
Score = 39.5 bits (88), Expect = 0.059
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 109 IDGMVS--LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVT 282
+DG S L V N+ + TT EDLR +F CG V + IP R R SRG+ F+S
Sbjct: 3 VDGGSSARLYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGRQGR-SRGYGLVEFNSEAE 61
Query: 283 LKKPWTR 303
+ TR
Sbjct: 62 AQAAVTR 68
>UniRef50_Q4UCX7 Cluster: RNA poly(A)-binding protein, putative;
n=3; Piroplasmida|Rep: RNA poly(A)-binding protein,
putative - Theileria annulata
Length = 176
Score = 39.5 bits (88), Expect = 0.059
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
S+ V N+ Y T P++L+ F+ G++ I I D+YT +G+A FS+
Sbjct: 43 SIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKYTGHPKGYAYVEFSN 92
>UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Rep:
PRM10 protein - Dugesia japonica (Planarian)
Length = 325
Score = 39.5 bits (88), Expect = 0.059
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
D L V L++ TT EDL+ FE G+V I D+ T SRGF + +LKK
Sbjct: 69 DDSRKLFVGGLSWETTEEDLKNYFETWGKVAHCVIKLDKMTGNSRGFGFVTMDTEDSLKK 128
>UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 886
Score = 39.5 bits (88), Expect = 0.059
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +1
Query: 67 SILLKMSYGRPPPRIDGMVSLK-----VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRY 231
S L ++ RPP +I+ + V NL Y TT +LR VFE+ GE+ +I +P +
Sbjct: 666 SFKLVVAISRPPKKIETRKQVMHRQVCVKNLDYYTTESELRTVFEKHGELEEISLPIKKD 725
Query: 232 TRESRGFAS*GFSSVVTLKKP 294
R ++G + G++ V +P
Sbjct: 726 MR-NKGHVNGGYAFVTFKTEP 745
Score = 33.1 bits (72), Expect = 5.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 94 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGD 207
+P R + +KV+N+ T DL+ +F CGE+ D
Sbjct: 510 KPAARNRESLKIKVENIPKSATENDLKLIFSDCGEIAD 547
>UniRef50_P48810 Cluster: Heterogeneous nuclear ribonucleoprotein
87F; n=16; Coelomata|Rep: Heterogeneous nuclear
ribonucleoprotein 87F - Drosophila melanogaster (Fruit
fly)
Length = 385
Score = 39.5 bits (88), Expect = 0.059
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L + L YRTT + L+ FE+ G + D+ + +D T+ SRGF
Sbjct: 26 LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGF 67
>UniRef50_Q6PNM9 Cluster: AUF1 similar protein; n=3; Paracentrotus
lividus|Rep: AUF1 similar protein - Paracentrotus
lividus (Common sea urchin)
Length = 361
Score = 39.1 bits (87), Expect = 0.078
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
L V L + TTPE L++ F G V D I +D+ T++ RGF F S ++ K
Sbjct: 52 LFVGGLAWNTTPETLQQYFSAYGTVQDCEIKKDQVTKKPRGFGFILFESADSVTK 106
>UniRef50_Q5CX28 Cluster: RRM domain containing protein; T22E16.120
Sc35-like splicing factor; n=3; Cryptosporidium|Rep: RRM
domain containing protein; T22E16.120 Sc35-like splicing
factor - Cryptosporidium parvum Iowa II
Length = 344
Score = 39.1 bits (87), Expect = 0.078
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
SL + +L + T +RR FER G + D+Y+P D +R RGF
Sbjct: 28 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGF 70
>UniRef50_Q6ZR81 Cluster: CDNA FLJ46566 fis, clone THYMU3040829,
moderately similar to Cold- inducible RNA-binding
protein; n=1; Homo sapiens|Rep: CDNA FLJ46566 fis, clone
THYMU3040829, moderately similar to Cold- inducible
RNA-binding protein - Homo sapiens (Human)
Length = 135
Score = 39.1 bits (87), Expect = 0.078
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSV 276
L V L++ T + L +VF + G++ ++ + +DR T+ SRGF F ++
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENI 57
>UniRef50_Q7ZWE3 Cluster: La-related protein 7; n=3;
Clupeocephala|Rep: La-related protein 7 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 555
Score = 39.1 bits (87), Expect = 0.078
Identities = 24/59 (40%), Positives = 31/59 (52%)
Frame = +1
Query: 79 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
K G P +D ++ V+ L T L RVF +CG V I IPR + TR S+GFA
Sbjct: 120 KEPLGETPKDVDSR-TVYVELLPKTVTHIWLERVFSKCGHVVYISIPRYKSTRHSKGFA 177
>UniRef50_P41891 Cluster: Protein gar2; n=12; Ascomycota|Rep:
Protein gar2 - Schizosaccharomyces pombe (Fission yeast)
Length = 500
Score = 39.1 bits (87), Expect = 0.078
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
V NL++ T +DL F CG++ I +P D + +GF FS + + KK
Sbjct: 370 VGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKK 422
>UniRef50_Q14011 Cluster: Cold-inducible RNA-binding protein; n=62;
Eukaryota|Rep: Cold-inducible RNA-binding protein - Homo
sapiens (Human)
Length = 172
Score = 39.1 bits (87), Expect = 0.078
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSV 276
L V L++ T + L +VF + G++ ++ + +DR T+ SRGF F ++
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENI 57
>UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid
CG16901-PC, isoform C; n=2; Apocrita|Rep: PREDICTED:
similar to squid CG16901-PC, isoform C - Apis mellifera
Length = 320
Score = 38.7 bits (86), Expect = 0.10
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +1
Query: 103 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVT 282
P D L V L+ TT ++LR F + GE+ I + D YT SRGFA F++ T
Sbjct: 53 PGKDDERKLFVGGLSRNTTDKELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFTNPKT 112
Query: 283 LKK 291
+ K
Sbjct: 113 IDK 115
>UniRef50_UPI00006CFFFC Cluster: RNA binding protein; n=1;
Tetrahymena thermophila SB210|Rep: RNA binding protein -
Tetrahymena thermophila SB210
Length = 451
Score = 38.7 bits (86), Expect = 0.10
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 109 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+D ++ V NL ++ + E LR FE CG++ ++ + RD T E +GF
Sbjct: 179 LDYTRTIFVGNLHFKISEEQLRHHFESCGDILNVRVIRDPKTHEGKGF 226
>UniRef50_Q9CAE4 Cluster: Putative uncharacterized protein
F13M14.33; n=5; Magnoliophyta|Rep: Putative
uncharacterized protein F13M14.33 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 261
Score = 38.7 bits (86), Expect = 0.10
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+L V NL + T D+ +F G+V + + +DR+TR+SRG A
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVA 101
>UniRef50_Q1PEP5 Cluster: Nucleolin; n=2; Arabidopsis thaliana|Rep:
Nucleolin - Arabidopsis thaliana (Mouse-ear cress)
Length = 636
Score = 38.7 bits (86), Expect = 0.10
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
++LR F +CGEV +++P DR T SRGFA
Sbjct: 497 KELRSHFSKCGEVTRVHVPTDRETGASRGFA 527
>UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2;
Ostreococcus|Rep: Initiation factor 3g - Ostreococcus
tauri
Length = 311
Score = 38.7 bits (86), Expect = 0.10
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
S++V NL+ T +DL+ +F G V IY+ +R T E+RGFA
Sbjct: 229 SIRVSNLSEDTREQDLQELFRPFGPVTRIYVAINRDTGEARGFA 272
>UniRef50_Q95ZH1 Cluster: RBD protein; n=1; Chironomus tentans|Rep:
RBD protein - Chironomus tentans (Midge)
Length = 849
Score = 38.7 bits (86), Expect = 0.10
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS 258
NL Y T +D++ VFE+ G V ++ +P D TR+ +GF +
Sbjct: 323 NLPYTVTEDDVQTVFEKYGNVVEVNVPIDPTTRKIKGFGT 362
>UniRef50_Q54CU2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 306
Score = 38.7 bits (86), Expect = 0.10
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
+L V NL RT DLR F G+V D I D T+ESRGF +SS
Sbjct: 72 TLHVSNLNPRTRESDLRDTFASIGKVIDCTILLDPNTKESRGFGFVTYSS 121
>UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein msi-1 - Caenorhabditis elegans
Length = 320
Score = 38.7 bits (86), Expect = 0.10
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+ L+++TT E+LR F R GEV + + RD T+ +RGF
Sbjct: 49 IGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGF 88
Score = 32.3 bits (70), Expect = 8.9
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
+ L+ +T ED+++ FE G+V D + D+ T+ RGF F S
Sbjct: 138 IGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDS 184
>UniRef50_A7SCR4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 607
Score = 38.7 bits (86), Expect = 0.10
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
SL V NL+Y TT + L FE C I+ DR + ESRGF + V T KK
Sbjct: 478 SLIVRNLSYDTTTDSLGAAFEGCSNAKVIF---DRESGESRGFGFVDYDDVETAKK 530
>UniRef50_A7AN88 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 643
Score = 38.7 bits (86), Expect = 0.10
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
+ NL+Y TT E +R +F CGEV IP+ +S G GF+S
Sbjct: 481 IRNLSYNTTEETMRELFSECGEVIRCVIPKFEENGKSMGRCFIGFTS 527
>UniRef50_A2QMQ9 Cluster: Function: AUF1 of H. sapiens is a
component of the ribonucleosomes; n=16;
Pezizomycotina|Rep: Function: AUF1 of H. sapiens is a
component of the ribonucleosomes - Aspergillus niger
Length = 315
Score = 38.7 bits (86), Expect = 0.10
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
+L V + R T D+ R+FE+ G+V + I D +T+ESRGF GF +VT ++
Sbjct: 68 NLFVTGIHPRLTESDISRLFEKYGDVENCSIMVDPHTKESRGF---GFVKMVTAEQ 120
>UniRef50_UPI00005A129E Cluster: PREDICTED: similar to Heterogeneous
nuclear ribonucleoprotein A1 (Helix-destabilizing
protein) (Single-strand binding protein) (hnRNP core
protein A1) (HDP); n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to Heterogeneous nuclear
ribonucleoprotein A1 (Helix-destabilizing protein)
(Single-strand binding protein) (hnRNP core protein A1)
(HDP) - Canis familiaris
Length = 200
Score = 38.3 bits (85), Expect = 0.14
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +1
Query: 82 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS* 261
MS P + + L + L++ TT E LR FE+ G + D RD T+ SRGF
Sbjct: 26 MSKSESPKEPEQLRKLFMGGLSFETTDESLRSHFEQWGTLTDCVEMRDPNTKRSRGF--- 82
Query: 262 GFSSVVTLKK 291
GF + T+++
Sbjct: 83 GFVTNATVEE 92
>UniRef50_UPI000065DEA8 Cluster: RNA-binding protein 24 (RNA-binding
motif protein 24) (RNA-binding region-containing protein
6).; n=1; Takifugu rubripes|Rep: RNA-binding protein 24
(RNA-binding motif protein 24) (RNA-binding
region-containing protein 6). - Takifugu rubripes
Length = 258
Score = 38.3 bits (85), Expect = 0.14
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF---AS*GFSSVVTLKKPWTR 303
V L Y TT LR+ FE G++ + + DR T +SRG+ +S F S+ + P TR
Sbjct: 15 VGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVSSNMFRSIRHFRSPGTR 74
>UniRef50_A7QJZ9 Cluster: Chromosome undetermined scaffold_109,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_109, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 170
Score = 38.3 bits (85), Expect = 0.14
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L V L++RTT E LR FE G++ ++ + D+ RGFA
Sbjct: 81 LYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFA 123
>UniRef50_Q17DU7 Cluster: RNA binding motif protein; n=3;
Culicidae|Rep: RNA binding motif protein - Aedes aegypti
(Yellowfever mosquito)
Length = 860
Score = 38.3 bits (85), Expect = 0.14
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
NL Y +DL+++FE+ G V +I +P D TR+ +GF
Sbjct: 309 NLAYSVKEDDLKQLFEKYGPVAEIDLPIDSNTRKLKGF 346
>UniRef50_A7AT82 Cluster: RNA recognition motif containing protein;
n=1; Babesia bovis|Rep: RNA recognition motif containing
protein - Babesia bovis
Length = 253
Score = 38.3 bits (85), Expect = 0.14
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
S+ + NL Y T ++R FE G++ D+Y+P+D + RGF
Sbjct: 10 SVLIRNLKYSTRASEVREAFECFGKIRDVYLPQDYSSGMPRGF 52
>UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative;
n=2; Plasmodium|Rep: Nucleic acid binding factor,
putative - Plasmodium vivax
Length = 753
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L V L TT E LR FE GE+ DIY+P D T RG A
Sbjct: 665 LFVTKLNSVTTIETLRNYFEAFGEIIDIYMPNDVCTNRPRGIA 707
Score = 32.3 bits (70), Expect = 8.9
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +1
Query: 109 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLK 288
+ G + V L + +DL + F + G++ DIY+ ++ +++GF F ++
Sbjct: 359 LKGYPRIFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMD 418
Query: 289 K 291
K
Sbjct: 419 K 419
>UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 147
Score = 38.3 bits (85), Expect = 0.14
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 118 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
M L + L + TT E LR+ F + G + + + +DR T SRGF F+S
Sbjct: 1 MSKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFAS 52
>UniRef50_Q0CIN3 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 306
Score = 38.3 bits (85), Expect = 0.14
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
+L V + R T D+ R+FE+ G+V + I D +T+ESRGF GF +VT ++
Sbjct: 56 NLFVTGIHPRLTEADISRLFEKYGDVENCSIMVDPHTKESRGF---GFVKMVTAEQ 108
>UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;
Bacteria|Rep: Putative RNA-binding protein rbpA -
Anabaena sp. (strain PCC 7120)
Length = 102
Score = 38.3 bits (85), Expect = 0.14
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+S+ V NL+Y T + L VF G V + +P DR T + RGF
Sbjct: 1 MSIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGF 44
>UniRef50_Q6DRI6 Cluster: KIAA0682-like; n=7; Danio rerio|Rep:
KIAA0682-like - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 927
Score = 37.9 bits (84), Expect = 0.18
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L + N+ Y T EDL+ +F + G + ++ P D T++ +GFA
Sbjct: 401 LFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFA 443
>UniRef50_Q8I5N6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1119
Score = 37.9 bits (84), Expect = 0.18
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
L V NL ++ E+LR++F G V + IP++ Y R SRG+A F S
Sbjct: 985 LVVKNLAFQVNKEELRKLFSAFGNVKSVRIPKNVYNR-SRGYAFIEFMS 1032
>UniRef50_Q7R874 Cluster: RNA recognition motif, putative; n=6;
Plasmodium (Vinckeia)|Rep: RNA recognition motif,
putative - Plasmodium yoelii yoelii
Length = 767
Score = 37.9 bits (84), Expect = 0.18
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
L V NL ++ T E+L+++F G + ++ IP++ Y R SRG+ F S
Sbjct: 630 LLVKNLAFQVTKEELKKLFSAFGNIKNVRIPKNAYNR-SRGYGFVEFMS 677
>UniRef50_A7SIF0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 190
Score = 37.9 bits (84), Expect = 0.18
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
D L V L TT E LR FE GE+ D+ + D T++SRGF
Sbjct: 11 DPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGF 57
>UniRef50_Q7RXY7 Cluster: Putative uncharacterized protein
NCU00457.1; n=3; Pezizomycotina|Rep: Putative
uncharacterized protein NCU00457.1 - Neurospora crassa
Length = 559
Score = 37.9 bits (84), Expect = 0.18
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKKPWTR 303
NL+Y T E + FE C +V ++ I DR T+ +GFA F V LK TR
Sbjct: 87 NLSYNATAESVTEFFEGC-DVVNVRIIEDRETQRPKGFAYAEFKDVEGLKTALTR 140
>UniRef50_Q5KLP3 Cluster: Poly(A) binding protein, putative; n=1;
Filobasidiella neoformans|Rep: Poly(A) binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 210
Score = 37.9 bits (84), Expect = 0.18
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 118 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
M S+ + N+ Y TPE+++ F+ CG + + I D++T +G+A
Sbjct: 92 MRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYA 137
>UniRef50_Q22037 Cluster: Heterogeneous nuclear ribonucleoprotein
A1; n=5; Caenorhabditis|Rep: Heterogeneous nuclear
ribonucleoprotein A1 - Caenorhabditis elegans
Length = 346
Score = 37.9 bits (84), Expect = 0.18
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
V LT TT + +R + + GE+ DI + RD T+ SRGF FS
Sbjct: 27 VGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 72
>UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41;
Bacteria|Rep: Putative RNA-binding protein rbpB -
Anabaena sp. (strain PCC 7120)
Length = 103
Score = 37.9 bits (84), Expect = 0.18
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+S+ V NL+Y T E L VF G V + +P DR T RGF
Sbjct: 1 MSIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGF 44
>UniRef50_Q08208 Cluster: Nucleolar protein 12; n=5;
Saccharomycetales|Rep: Nucleolar protein 12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 459
Score = 37.9 bits (84), Expect = 0.18
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +1
Query: 85 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*G 264
S P P D S+ V NL + E L + FE CG++ + I RD T +GFA
Sbjct: 268 SVAHPAPH-DKKRSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQ 326
Query: 265 FSSVVTLKK 291
F + ++ K
Sbjct: 327 FKDLQSVNK 335
>UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1;
n=65; Euteleostomi|Rep: RNA-binding protein Musashi
homolog 1 - Homo sapiens (Human)
Length = 362
Score = 37.9 bits (84), Expect = 0.18
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+ L+++TT E LR F + GEV + + RD T+ SRGF
Sbjct: 24 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGF 63
Score = 36.7 bits (81), Expect = 0.41
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 100 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVV 279
P + + V L+ TT ED+++ FE+ G+V D + D+ T RGF F S
Sbjct: 102 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161
Query: 280 TLKK 291
++K
Sbjct: 162 IVEK 165
>UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 37.5 bits (83), Expect = 0.24
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1
Query: 118 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
M L + +L Y T E L+ FE+ G V D + DR ++ S+GF F KK
Sbjct: 1 MTRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKK 58
>UniRef50_Q9SVM7 Cluster: RNA-binding protein like; n=1; Arabidopsis
thaliana|Rep: RNA-binding protein like - Arabidopsis
thaliana (Mouse-ear cress)
Length = 126
Score = 37.5 bits (83), Expect = 0.24
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
+L+ TT + LR F G V D + RDRYT SRGF +SS
Sbjct: 48 DLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSS 92
>UniRef50_Q0ITI7 Cluster: Os11g0250000 protein; n=5; Oryza
sativa|Rep: Os11g0250000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 500
Score = 37.5 bits (83), Expect = 0.24
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
+ L TT EDLR + + GE+ ++ + +D+ T+E++GFA F++
Sbjct: 108 IGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNFTA 154
>UniRef50_Q8I2R8 Cluster: RNA-binding protein, putative; n=5;
Plasmodium|Rep: RNA-binding protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 202
Score = 37.5 bits (83), Expect = 0.24
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLK 288
S+ V N+ Y T PE+L+ +F CG + + I ++ T S+G+A F+ +++
Sbjct: 72 SIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVR 126
>UniRef50_Q4UFE0 Cluster: Nucleolar, RNA-binding protein, putative;
n=2; Theileria|Rep: Nucleolar, RNA-binding protein,
putative - Theileria annulata
Length = 560
Score = 37.5 bits (83), Expect = 0.24
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
+ NL + ++ E LR +F CG+V Y+P+ + T + G F++V K+
Sbjct: 425 IRNLNFNSSEEGLRELFSECGQVTRCYVPKFQDTGKPMGIGFISFTTVEAAKR 477
>UniRef50_A7AW01 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 279
Score = 37.5 bits (83), Expect = 0.24
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
V NL Y T +LR + + CG + I +DR T +S+G+A
Sbjct: 25 VGNLPYEITEIELRNILQGCGNIRFAIIRKDRQTNKSKGYA 65
>UniRef50_Q9P383 Cluster: Nuclear cap-binding complex small subunit;
n=1; Schizosaccharomyces pombe|Rep: Nuclear cap-binding
complex small subunit - Schizosaccharomyces pombe
(Fission yeast)
Length = 182
Score = 37.5 bits (83), Expect = 0.24
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V NL++ TT E + +F +CGE+ I + DR+T+ GF
Sbjct: 36 VGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRFTKTPCGF 75
>UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n=1;
Schizosaccharomyces pombe|Rep: mRNA cleavage factor
complex subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 474
Score = 37.5 bits (83), Expect = 0.24
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +1
Query: 97 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
P R DG + + L + TT + LR FE+ GEV D + RD T SRGF
Sbjct: 157 PFNREDG--KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGF 206
>UniRef50_UPI000049956B Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 297
Score = 37.1 bits (82), Expect = 0.31
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 76 LKMSYGRPPP----RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 243
+K++Y P +++ + V ++ TT L ++F +CG+V + IP R T +
Sbjct: 93 MKLNYKHLPKTTQKKMNNSYCIFVGKVSSITTESTLVKIFAKCGKVLRVTIPIWRNTNKR 152
Query: 244 RGFAS*GFSSVVTLKK 291
RGFA F+S+ +++K
Sbjct: 153 RGFAVVEFASLASVEK 168
>UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11;
Magnoliophyta|Rep: AT4g36960/C7A10_400 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 379
Score = 37.1 bits (82), Expect = 0.31
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 88 YGRPPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
YGR P G+ + + V L + +DLR F R G + D YIP+D RGF
Sbjct: 228 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGF 283
Score = 36.7 bits (81), Expect = 0.41
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 166 DLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
D R FER GE+ D+Y+P+D +++ RG FSS
Sbjct: 106 DFRSHFERYGEITDLYMPKDYNSKQHRGIGFITFSS 141
>UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidopsis
thaliana|Rep: RNA-binding like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 306
Score = 37.1 bits (82), Expect = 0.31
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 88 YGRPPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
YGR P G+ + + V L + +DLR F R G + D YIP+D RGF
Sbjct: 172 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGF 227
>UniRef50_A7QRC1 Cluster: Chromosome chr13 scaffold_149, whole
genome shotgun sequence; n=7; Vitis vinifera|Rep:
Chromosome chr13 scaffold_149, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 808
Score = 37.1 bits (82), Expect = 0.31
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 3/93 (3%)
Frame = -2
Query: 567 TLSHHRTFQCLDRERERLCDGNVPWNSLSQSESDCANGCGYDCASNYXGGNETWTCACDR 388
TL H F+ +R+++ W+ + + D + S G N C D
Sbjct: 265 TLDHDGVFRLYNRDKKVGSHNTSSWSVMKNTPYDICDATPSSLGSGICGFNSY--CIVDE 322
Query: 387 NDSCMAMRGD---HIAPSEREVPCRPTFVRPSC 298
+ D H+ PS+R+ C+P F PSC
Sbjct: 323 EGLPQCLCPDEYSHLDPSDRKQGCKPNFELPSC 355
>UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06087 protein - Schistosoma
japonicum (Blood fluke)
Length = 390
Score = 37.1 bits (82), Expect = 0.31
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
D L V L++ T DL+ F R G+V I DR+T SRGF
Sbjct: 56 DDSRKLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNSRGF 102
>UniRef50_O45713 Cluster: Putative uncharacterized protein; n=5;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 85
Score = 37.1 bits (82), Expect = 0.31
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
S+ V N ++TT +DL F + G V ++ I DR T RGFA
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFA 48
>UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 37.1 bits (82), Expect = 0.31
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+ NL Y D+ VF + GE+ D+++ RD+ T +S+GF
Sbjct: 33 IANLNYAMNEGDIAIVFSQYGEIVDVHLVRDKITGKSKGF 72
>UniRef50_Q8TBF4 Cluster: Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; n=32; Eumetazoa|Rep: Zinc
finger CCHC-type and RNA-binding motif-containing
protein 1 - Homo sapiens (Human)
Length = 217
Score = 37.1 bits (82), Expect = 0.31
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
V NL + T DL R+F + G+V + I +D+ TR+S+G A
Sbjct: 14 VSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVA 54
>UniRef50_Q13595 Cluster: Transformer-2 protein homolog; n=57;
Eumetazoa|Rep: Transformer-2 protein homolog - Homo
sapiens (Human)
Length = 282
Score = 37.1 bits (82), Expect = 0.31
Identities = 23/64 (35%), Positives = 30/64 (46%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
D L V L+ TT DLR VF R G + + + D+ T SRGFA F + K+
Sbjct: 116 DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKE 175
Query: 292 PWTR 303
R
Sbjct: 176 AMER 179
>UniRef50_Q57014 Cluster: Putative RNA-binding protein rbpA; n=70;
cellular organisms|Rep: Putative RNA-binding protein
rbpA - Synechocystis sp. (strain PCC 6803)
Length = 101
Score = 37.1 bits (82), Expect = 0.31
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+S+ V NL+Y + DL VF G V + +P DR T RGF
Sbjct: 1 MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGF 44
>UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=11;
Pezizomycotina|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Coccidioides immitis
Length = 768
Score = 37.1 bits (82), Expect = 0.31
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
V N+ TT E+ R +FE+ GE+ + RD + +SRGF F+S
Sbjct: 240 VKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTS 286
>UniRef50_UPI000051A8B9 Cluster: PREDICTED: similar to CG1316-PA;
n=2; Endopterygota|Rep: PREDICTED: similar to CG1316-PA
- Apis mellifera
Length = 482
Score = 36.7 bits (81), Expect = 0.41
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
+DLR+ FE+ G++ DI++ +DR T E++G FS
Sbjct: 39 DDLRKAFEKFGKIEDIWVVKDRITGENKGVTYIKFS 74
>UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF14577, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 278
Score = 36.7 bits (81), Expect = 0.41
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V L Y TT LR+ FE GE+ + + DR T +SRG+
Sbjct: 15 VGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGY 54
>UniRef50_O35698 Cluster: RNA-binding protein; n=7; Mus
musculus|Rep: RNA-binding protein - Mus musculus (Mouse)
Length = 380
Score = 36.7 bits (81), Expect = 0.41
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+ L +T + L+ +F R G V + + RDR T++SRGFA
Sbjct: 12 IGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFA 52
>UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular
organisms|Rep: RNA-binding protein - Gloeobacter
violaceus
Length = 123
Score = 36.7 bits (81), Expect = 0.41
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
V NL + T +D+ F G V + IP DR T RGFA
Sbjct: 5 VGNLPFSVTEQDITEAFSEYGTVKSVKIPTDRETGRPRGFA 45
>UniRef50_Q9LNV4 Cluster: F22G5.31; n=12; Magnoliophyta|Rep:
F22G5.31 - Arabidopsis thaliana (Mouse-ear cress)
Length = 415
Score = 36.7 bits (81), Expect = 0.41
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCG---EVGDIYIPRDRYTRESRGFAS*GFSSV 276
SL V L++R T DL F + G +V D+++ D +TRESRGF SV
Sbjct: 108 SLYVTGLSHRVTERDLEDHFAKEGKVVDVTDVHLVLDPWTRESRGFGFISMKSV 161
>UniRef50_Q9U5E3 Cluster: CiMsi; n=1; Ciona intestinalis|Rep: CiMsi
- Ciona intestinalis (Transparent sea squirt)
Length = 393
Score = 36.7 bits (81), Expect = 0.41
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V L +TT E LR FE GEV D + +D+ T SRGF
Sbjct: 14 VGGLARQTTLEGLRSYFENYGEVSDCVLMKDKETGFSRGF 53
>UniRef50_A7SCX6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 305
Score = 36.7 bits (81), Expect = 0.41
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
D + L V L+Y TT E L+ F + GE+ + I D T RGFA
Sbjct: 26 DDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFA 73
>UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 341
Score = 36.7 bits (81), Expect = 0.41
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSV 276
+L + NL Y T E L++VF R GEV + I D SRGF F S+
Sbjct: 150 TLYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYDN-RGMSRGFGYVEFKSI 199
>UniRef50_A1DIK1 Cluster: Translation initiation factor 4B; n=8;
Eurotiomycetidae|Rep: Translation initiation factor 4B -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 512
Score = 36.7 bits (81), Expect = 0.41
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
V NL++ T D+ +F CG V ++ I D+ TR +GF F +V LKK
Sbjct: 90 VGNLSFEATSADINDLFAGCG-VTNVRIVEDKLTRTPKGFGYVEFETVDGLKK 141
>UniRef50_Q4SLY2 Cluster: Chromosome 13 SCAF14555, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 13
SCAF14555, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 944
Score = 36.3 bits (80), Expect = 0.55
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Frame = -2
Query: 453 CGYDCASNYXGGNETWTCACDRNDSCMAMRGDHI-APSEREVPCRPTFVRPSCPGLLQRH 277
C C + G N +++C+C SC G + AP R C+ R PG
Sbjct: 466 CDNVCPQGFWGPNCSFSCSCQNGGSCSPEDGTCVCAPGYRGTSCK----RICSPGFYGHR 521
Query: 276 DARKTSRSESSTFPCVPISGNVD-ITNFSAPFEN 178
++ + ST PC I+G + + FS N
Sbjct: 522 CSQSCPQCVHSTGPCHHITGQCECLPGFSGSLCN 555
Score = 32.3 bits (70), Expect = 8.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -2
Query: 513 CDGNVPWNSLSQSESDCANGCGYDCASNYXGGNETWTCACDRNDSCMAMRG 361
C W L S ++ ANG G C S+Y G + + C C C + G
Sbjct: 86 CQCEPGWGGLDCSSANTANGTG--CESDYWGPHCSNRCQCQNGAKCNPITG 134
>UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6;
cellular organisms|Rep: Glycin-rich RNA binding protein
- Polytomella sp. Pringsheim 198.80
Length = 177
Score = 36.3 bits (80), Expect = 0.55
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L V NL++ EDLR F + GEV + I DR + SRGF
Sbjct: 5 LYVGNLSWNAKEEDLRTYFGKFGEVEEASIALDRESGRSRGF 46
>UniRef50_Q01B63 Cluster: RNA recognition motif; n=2;
Ostreococcus|Rep: RNA recognition motif - Ostreococcus
tauri
Length = 907
Score = 36.3 bits (80), Expect = 0.55
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
V NL Y T E++ +FE+ G++ ++I DR T+ S+G A
Sbjct: 366 VRNLPYTATEEEVAELFEQFGKLSAVHILVDRSTKRSKGLA 406
>UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr8 scaffold_23, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 293
Score = 36.3 bits (80), Expect = 0.55
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+++V NL+ T DLR +F R G++ +Y+ D T SRGF
Sbjct: 213 AVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGF 255
>UniRef50_Q93233 Cluster: Putative uncharacterized protein pabp-2;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein pabp-2 - Caenorhabditis elegans
Length = 205
Score = 36.3 bits (80), Expect = 0.55
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
S+ V N+ Y T E++ + F CG V + I DR++ +GFA
Sbjct: 79 SVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFA 122
>UniRef50_Q57YP5 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 184
Score = 36.3 bits (80), Expect = 0.55
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 130 KVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
K DN TTPE+L +F CG + + + RDR T E +G A FS+ + K
Sbjct: 113 KGDNGGPTTTPEELAHLFADCGPILNCTLLRDRTTGELKGTAYVEFSTYTGMGK 166
>UniRef50_Q4UHB5 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
annulata
Length = 1024
Score = 36.3 bits (80), Expect = 0.55
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+ L V NL + +D+R CG++ + I RD +T SRG+A
Sbjct: 8 IKLFVGNLPFDAVEDDIRVFLHGCGQIRYLSIRRDPHTNRSRGYA 52
>UniRef50_Q4PBV1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 192
Score = 36.3 bits (80), Expect = 0.55
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V NL++ TT + L F G++ D + +DR T SRGF
Sbjct: 7 VGNLSWNTTDDSLAHAFSTYGQLTDYIVMKDRETGRSRGF 46
>UniRef50_Q09301 Cluster: Putative RNA-binding protein EEED8.12;
n=4; Caenorhabditis|Rep: Putative RNA-binding protein
EEED8.12 - Caenorhabditis elegans
Length = 197
Score = 36.3 bits (80), Expect = 0.55
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
S+ + N+ + +T E++ F+ CG + IP+D++T++ + FA
Sbjct: 62 SVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFA 105
>UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22;
Endopterygota|Rep: RNA-binding protein squid -
Drosophila melanogaster (Fruit fly)
Length = 344
Score = 36.3 bits (80), Expect = 0.55
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
L V L++ TT ++LR F + GE+ I + D T SRGFA F++ + K
Sbjct: 58 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDK 112
>UniRef50_Q9BX46 Cluster: RNA-binding protein 24; n=52;
Eumetazoa|Rep: RNA-binding protein 24 - Homo sapiens
(Human)
Length = 236
Score = 36.3 bits (80), Expect = 0.55
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V L Y TT LR+ FE GE+ + + DR T +SRG+
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGY 54
>UniRef50_Q8WXF1 Cluster: Paraspeckle component 1; n=27;
Euteleostomi|Rep: Paraspeckle component 1 - Homo sapiens
(Human)
Length = 523
Score = 36.3 bits (80), Expect = 0.55
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 228
L V NL T ED +R+FER GE +++I RDR
Sbjct: 84 LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDR 117
>UniRef50_Q06106 Cluster: Multiple RNA-binding domain-containing
protein 1; n=7; Saccharomycetales|Rep: Multiple
RNA-binding domain-containing protein 1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 887
Score = 36.3 bits (80), Expect = 0.55
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
N+ Y + ED R++F GE+ ++++ D T +S+GFA
Sbjct: 351 NILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFA 389
>UniRef50_UPI00015B552E Cluster: PREDICTED: similar to bruno; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to bruno -
Nasonia vitripennis
Length = 544
Score = 35.9 bits (79), Expect = 0.72
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +1
Query: 25 NNIVLFNLFDLS*ISILLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVG 204
N L + FD+ SI+ S +P P + + V + DLR +FE G V
Sbjct: 13 NKCALADGFDIG-FSIMNNNSVEKPDP---DNIKMFVGQVPKDLDENDLRTIFEEFGRVH 68
Query: 205 DIYIPRDRYTRESRG 249
I + RD+YT S+G
Sbjct: 69 QINVLRDKYTGSSKG 83
>UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to GA10247-PA - Strongylocentrotus purpuratus
Length = 519
Score = 35.9 bits (79), Expect = 0.72
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V L V L Y TT E+++ F + GE+ ++ RD T++S+GF
Sbjct: 119 VDLIVLGLDYNTTDEEMKEYFGKYGELLMAHVKRDPVTQKSKGF 162
Score = 33.5 bits (73), Expect = 3.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPR 222
L + LT TT EDL +F + GEV D++IP+
Sbjct: 207 LFIGRLTSDTTKEDLFDIFSKYGEVVDVFIPK 238
>UniRef50_UPI000023E598 Cluster: hypothetical protein FG10156.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10156.1 - Gibberella zeae PH-1
Length = 420
Score = 35.9 bits (79), Expect = 0.72
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V N+ ++TT EDL R FE+CGE+ + + T + +G+
Sbjct: 236 VGNMGFKTTDEDLSRNFEKCGEIEWVKVATFEDTGKCKGY 275
>UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|Rep:
MGC84815 protein - Xenopus laevis (African clawed frog)
Length = 291
Score = 35.9 bits (79), Expect = 0.72
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +1
Query: 103 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVT 282
P+ D L V L +T + LR + + GE+ D+ + +D + +SRGF F +
Sbjct: 7 PKADQDKKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASS 66
Query: 283 LKK 291
+ K
Sbjct: 67 VDK 69
>UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8;
Clupeocephala|Rep: Cold inducible RNA binding protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 223
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L + L+Y TT + L F + G + + + RDR T SRGF
Sbjct: 24 LFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGF 65
>UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1;
Treponema pallidum|Rep: RNA-binding protein, putative -
Treponema pallidum
Length = 105
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V NL Y TT L +F + GEV + + +D+ T+ S+GF
Sbjct: 23 VGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGF 62
>UniRef50_Q9SJT4 Cluster: Expressed protein; n=1; Arabidopsis
thaliana|Rep: Expressed protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1003
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L + NL ++ P D++ VF G V D++IP++ T +GFA
Sbjct: 333 LIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFA 375
>UniRef50_Q9FFZ6 Cluster: Similarity to RNA-binding protein; n=2;
core eudicotyledons|Rep: Similarity to RNA-binding
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 35.9 bits (79), Expect = 0.72
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
L + L++ TT + L F +CG+V + I DR + S+GF F+S +K
Sbjct: 36 LFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQK 90
>UniRef50_Q7XGR3 Cluster: RNA recognition motif family protein,
expressed; n=2; Oryza sativa|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 472
Score = 35.9 bits (79), Expect = 0.72
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+ L TT +DL + E GE+ ++ + +D+ T+E++GFA
Sbjct: 113 IGGLPRDTTEDDLHELCEAFGEISEVRLMKDKETKENKGFA 153
>UniRef50_Q2I310 Cluster: RNA recognition motif-containing protein;
n=9; Magnoliophyta|Rep: RNA recognition motif-containing
protein - Vitis pseudoreticulata
Length = 194
Score = 35.9 bits (79), Expect = 0.72
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
S+ + NL R + L + + G V D+YIPRD+ T +GFA
Sbjct: 8 SVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFA 51
>UniRef50_Q018A5 Cluster: Putativ; n=2; Ostreococcus|Rep: Putativ -
Ostreococcus tauri
Length = 417
Score = 35.9 bits (79), Expect = 0.72
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 106 RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTL 285
+I+G V NL Y T E LR F GE+ D+ + D+ T + RG+A F++ L
Sbjct: 305 KIEGQFVAFVANLDYSVTEEMLRETFS--GEIKDVRMGNDKATGDFRGYAHVEFATDEDL 362
Query: 286 KK 291
++
Sbjct: 363 ER 364
>UniRef50_O44530 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 177
Score = 35.9 bits (79), Expect = 0.72
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
S+ V N+ +++T ++ F CG+V + IP+D++T + FA
Sbjct: 47 SVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFA 90
>UniRef50_A7RXI1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 424
Score = 35.9 bits (79), Expect = 0.72
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 249
R ED+R FE+ G + D+++ +D+ T+E+RG
Sbjct: 27 RHNAEDIRSAFEQYGTIEDVWVVKDKATKENRG 59
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
EDLR FE G++ + I RD TRE++G+
Sbjct: 126 EDLRSKFESFGDIEYVQIVRDHKTRENKGY 155
>UniRef50_A7AWX7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD,
or RNP) domain containing protein; n=1; Babesia
bovis|Rep: RNA recognition motif. (A.k.a. RRM, RBD, or
RNP) domain containing protein - Babesia bovis
Length = 110
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L + L T+ +R F + GE+ + YIPRD YT + +GF
Sbjct: 31 LFIGRLDPDTSVGTMRHYFGQFGEIAEAYIPRDSYTLKGKGF 72
>UniRef50_Q8IY53 Cluster: Putative uncharacterized protein; n=1;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 248
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 157 TPED-LRRVFERCGEVGDIYIPRDRYTRESRGFA 255
TPE LR F G++ DI++ RD++T+ES+G A
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIA 69
>UniRef50_A6RJZ8 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 790
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
++ V N+ T E+ R +FE+ G+V + RD T +SRGF
Sbjct: 243 NIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGF 285
>UniRef50_Q8IUH3 Cluster: RNA-binding protein 45; n=27;
Euteleostomi|Rep: RNA-binding protein 45 - Homo sapiens
(Human)
Length = 476
Score = 35.9 bits (79), Expect = 0.72
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 157 TPED-LRRVFERCGEVGDIYIPRDRYTRESRGFA 255
TPE LR F G++ DI++ RD++T+ES+G A
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIA 69
>UniRef50_Q6CEW9 Cluster: Multiple RNA-binding domain-containing
protein 1; n=1; Yarrowia lipolytica|Rep: Multiple
RNA-binding domain-containing protein 1 - Yarrowia
lipolytica (Candida lipolytica)
Length = 828
Score = 35.9 bits (79), Expect = 0.72
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
NL Y ED R++F + GE+ ++++P + T + +GFA
Sbjct: 307 NLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFA 345
>UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep:
LOC443584 protein - Xenopus laevis (African clawed frog)
Length = 414
Score = 35.5 bits (78), Expect = 0.96
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
D S V NL Y E +R+ F +CG+V + I RD+ T +GF
Sbjct: 270 DNKRSAFVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGF 316
>UniRef50_Q9LU62 Cluster: Similarity to poly(A)-binding protein II;
n=17; Magnoliophyta|Rep: Similarity to poly(A)-binding
protein II - Arabidopsis thaliana (Mouse-ear cress)
Length = 267
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
S+ V N+ Y TPE++++ F+ CG V + I D++ + +GFA
Sbjct: 104 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFA 146
>UniRef50_Q0DZR5 Cluster: Os02g0602600 protein; n=3; Oryza
sativa|Rep: Os02g0602600 protein - Oryza sativa subsp.
japonica (Rice)
Length = 480
Score = 35.5 bits (78), Expect = 0.96
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L VDN+ R ++LRR+F R GE+ + DR T + RG+A
Sbjct: 193 LFVDNVPARAAHDELRRLFSRFGEIEAGPLGADRATGQFRGYA 235
>UniRef50_A7NUC5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 494
Score = 35.5 bits (78), Expect = 0.96
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
V L+ T E+ + FER G + D+ + D TR RGF F S
Sbjct: 127 VGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFES 173
>UniRef50_A3AAN7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 304
Score = 35.5 bits (78), Expect = 0.96
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V L + TT E LRR ++R GE+ + + DR++ S+G+
Sbjct: 41 VGGLAWETTSERLRRFYDRFGEILEAVVITDRHSGRSKGY 80
>UniRef50_Q9XU67 Cluster: Putative uncharacterized protein rbd-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein rbd-1 - Caenorhabditis elegans
Length = 872
Score = 35.5 bits (78), Expect = 0.96
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
NL Y T +DL+ +F++ GEV ++ + D+ T +GFA
Sbjct: 285 NLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFA 323
>UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing
protein; n=3; Cryptosporidium|Rep: U2 snRNP. Hsh49p, RRM
domain containing protein - Cryptosporidium parvum Iowa
II
Length = 216
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+L NL + E L +F +CG V ++IPRD+ T GF
Sbjct: 24 TLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGF 66
>UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n=3;
Cryptosporidium|Rep: 5x RRM. Mrd1p like, splicing
related - Cryptosporidium parvum Iowa II
Length = 806
Score = 35.5 bits (78), Expect = 0.96
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L V N++Y TT EDL + F + GEV + I R + S+G+
Sbjct: 289 LMVVNISYSTTEEDLNKFFSKWGEVKSVNIIRSPESGVSKGY 330
>UniRef50_Q5CRV5 Cluster: SPAC25G10.01-like RRM domain containing
protein; n=2; Cryptosporidium|Rep: SPAC25G10.01-like RRM
domain containing protein - Cryptosporidium parvum Iowa
II
Length = 253
Score = 35.5 bits (78), Expect = 0.96
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
D +L V L+ +T +DLRR+FE GEV D ++ + + ESR F
Sbjct: 68 DPSCTLYVCRLSLKTKEDDLRRLFEDYGEVTDCHLVTNPLSGESRCF 114
>UniRef50_Q5BW90 Cluster: SJCHGC05136 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05136 protein - Schistosoma
japonicum (Blood fluke)
Length = 184
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 118 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+ + V L Y TT E LR F++ G + + + DR T +SRG+
Sbjct: 11 LTKIFVGGLPYHTTDESLRCFFDQFGPIDEAVVITDRQTGKSRGY 55
>UniRef50_Q5BT94 Cluster: SJCHGC02233 protein; n=2; Bilateria|Rep:
SJCHGC02233 protein - Schistosoma japonicum (Blood
fluke)
Length = 65
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L V NL Y T ++L ++F G + DI++ D +++ S+GFA
Sbjct: 7 LFVRNLPYDCTEKELEKLFSPYGSLSDIHLAFDSWSQVSKGFA 49
>UniRef50_Q5KP81 Cluster: Transformer-2-beta isoform 3, putative;
n=2; Filobasidiella neoformans|Rep: Transformer-2-beta
isoform 3, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 277
Score = 35.5 bits (78), Expect = 0.96
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L V L+ RTT DL+ F R GE+ + I D+ T SRGF
Sbjct: 127 LGVFGLSVRTTERDLQDEFSRHGEIEKVVIVYDQRTGRSRGF 168
>UniRef50_Q5KBA9 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 373
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V L + T DL +F + GE+ D+ + RD+ T +SRGF
Sbjct: 35 VGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGF 74
>UniRef50_Q9H0Z9 Cluster: RNA-binding protein 38; n=16;
Eutheria|Rep: RNA-binding protein 38 - Homo sapiens
(Human)
Length = 216
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V L Y TT LR+ FE G++ + + DR T +SRG+
Sbjct: 15 VGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGY 54
>UniRef50_Q86U42 Cluster: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II) (PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1); n=58;
Coelomata|Rep: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II) (PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) - Homo sapiens
(Human)
Length = 306
Score = 35.5 bits (78), Expect = 0.96
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
S+ V N+ Y T E+L F CG V + I D+++ +GFA FS
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFS 221
>UniRef50_O13620 Cluster: Multiple RNA-binding domain-containing
protein 1; n=1; Schizosaccharomyces pombe|Rep: Multiple
RNA-binding domain-containing protein 1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 833
Score = 35.5 bits (78), Expect = 0.96
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
NLTY +DL+ +F G++ +++P D+ T +GFA
Sbjct: 329 NLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFA 367
>UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=74;
cellular organisms|Rep: Glycine-rich RNA-binding protein
8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 169
Score = 35.5 bits (78), Expect = 0.96
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V L + T EDL+R F + G+V D I DR + SRGF
Sbjct: 10 VGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGF 49
>UniRef50_UPI00015B6013 Cluster: PREDICTED: similar to GA12086-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA12086-PA - Nasonia vitripennis
Length = 489
Score = 35.1 bits (77), Expect = 1.3
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYTRESRG 249
E+LR+ FE+ G + DI++ +DR T E++G
Sbjct: 40 EELRKAFEKFGNIEDIWVVKDRNTGENKG 68
>UniRef50_Q3B6Q3 Cluster: RNA-binding region RNP-1; n=6;
Chlorobium/Pelodictyon group|Rep: RNA-binding region
RNP-1 - Pelodictyon luteolum (strain DSM 273)
(Chlorobium luteolum (strain DSM273))
Length = 99
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
D +++ + NL Y + +DLR F + G+V I D+++ S+GF SS
Sbjct: 7 DLKMNIYIGNLPYSVSEDDLRDAFSQFGQVDSANIIMDKFSGRSKGFGFVDMSS 60
>UniRef50_Q39SC4 Cluster: RNA-binding region RNP-1; n=2;
Geobacter|Rep: RNA-binding region RNP-1 - Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Length = 134
Score = 35.1 bits (77), Expect = 1.3
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 249
L V +++Y T +DLRR+F G V +++ DR T E +G
Sbjct: 7 LYVGHMSYEATEDDLRRLFTVAGTVTSVHLITDRDTGEFKG 47
>UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Rep:
At2g47310 - Arabidopsis thaliana (Mouse-ear cress)
Length = 512
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 112 DGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
DG ++ L V ++ T D+R+VFE+ G V +I +P+D+ T E +
Sbjct: 106 DGSIAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAY 153
>UniRef50_Q10RZ0 Cluster: RNA recognition motif family protein,
expressed; n=2; Oryza sativa|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 110
Score = 35.1 bits (77), Expect = 1.3
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 154 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
T EDLRR F+ G V +++P DR+T GFA
Sbjct: 18 TGDEDLRRHFQLFGYVASVHMPIDRHTGRHHGFA 51
>UniRef50_A2YWJ2 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 424
Score = 35.1 bits (77), Expect = 1.3
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
V L T +D + F++ G V D I RD T+ SRGF FSS
Sbjct: 177 VGGLPQALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSS 223
>UniRef50_A7SM09 Cluster: Predicted protein; n=4; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 83
Score = 35.1 bits (77), Expect = 1.3
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTL 285
S+ V NL R T E L +F + G + ++ IP D+ T + R F FSS V++
Sbjct: 4 SVFVGNLDSRVTEEILWELFLQAGPLENVRIPTDKNTGQQRSFGFVEFSSPVSV 57
>UniRef50_A7RLV0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 862
Score = 35.1 bits (77), Expect = 1.3
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +1
Query: 139 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 249
NL Y + ED++ +FE+ G + ++ +P D++T ++ G
Sbjct: 369 NLAYSCSEEDIQHLFEKFGPLSEVNLPLDKHTNKTIG 405
>UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia
japonica|Rep: HnRNP A2/B1 protein - Dugesia japonica
(Planarian)
Length = 386
Score = 35.1 bits (77), Expect = 1.3
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
V L +TT D+R+ F + G+V D+ RD+ +SRGF
Sbjct: 22 VGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNKSRGF 61
>UniRef50_A2DHI9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 156
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+KV+NL Y + D+ VFE+ G + + + RD T +SRG A
Sbjct: 37 IKVNNLNYELSEGDILTVFEQYGTIINFELIRDAKTGDSRGTA 79
>UniRef50_A6NDY0 Cluster: Uncharacterized protein ENSP00000367609;
n=5; Catarrhini|Rep: Uncharacterized protein
ENSP00000367609 - Homo sapiens (Human)
Length = 278
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 GRPPPRIDG-MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
G P +++ S+ V N+ Y + E+L F RCGEV + I D+++ +G+A
Sbjct: 136 GTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYA 191
>UniRef50_Q75EU7 Cluster: AAL018Wp; n=2; Eremothecium gossypii|Rep:
AAL018Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 337
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDI 210
S+ + NLTY TTPEDLR++F GEVG +
Sbjct: 8 SVFIGNLTYDTTPEDLRQLF---GEVGHV 33
>UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation factor
3, subunit 4 delta, 44kDa, putative; n=1; Filobasidiella
neoformans|Rep: Eukaryotic translation initiation factor
3, subunit 4 delta, 44kDa, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 290
Score = 35.1 bits (77), Expect = 1.3
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = +1
Query: 112 DGMVSLKVDNLTYRTTPEDLRRVFE---RCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
D + +L+V +L+ +DLR +F+ + G++G I RDR TR S+G A F S
Sbjct: 201 DELPTLRVTSLSIDAEEDDLRALFQPFAKNGKLGRANIVRDRNTRVSKGLAFVSFES 257
>UniRef50_Q1DZF7 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 334
Score = 35.1 bits (77), Expect = 1.3
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 79 KMSYGRPPPRIDGMVSLK----VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESR 246
+ S RP P DG ++ K V NL + T DL+ F +CG V + + D Y S+
Sbjct: 125 RFSIRRPKP--DGYIAPKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYD-YRGVSK 181
Query: 247 GFAS*GFSSVVTLKK 291
GF F V T +K
Sbjct: 182 GFGYVKFHDVETAEK 196
>UniRef50_A3LV94 Cluster: U4/U6 snRNA-associated splicing factor;
n=1; Pichia stipitis|Rep: U4/U6 snRNA-associated
splicing factor - Pichia stipitis (Yeast)
Length = 837
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 100 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 240
PPR + +KV+NLT T D+ R F CG + ++ I + T E
Sbjct: 456 PPRSRENLMVKVENLTSDVTRNDITRFFSDCGSIRELSIVENSATIE 502
>UniRef50_Q7U7Q8 Cluster: PutativeRNA-binding protein RbpD; n=9;
Cyanobacteria|Rep: PutativeRNA-binding protein RbpD -
Synechococcus sp. (strain WH8102)
Length = 96
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
+++ + NL+++ E L +F GEV + +P DR T RGFA
Sbjct: 1 MTIYIGNLSFQAEQEHLFDLFSEYGEVKNCSLPLDRETGRKRGFA 45
>UniRef50_Q48A10 Cluster: RNA-binding protein; n=2;
Alteromonadales|Rep: RNA-binding protein - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 160
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+L V NL YR +R +F G V + + +D++T + RGF
Sbjct: 72 TLYVGNLPYRANETSVRELFSEHGSVHSVRLMKDKHTGKRRGF 114
>UniRef50_A0WC53 Cluster: RNA-binding region RNP-1; n=2;
Desulfuromonadales|Rep: RNA-binding region RNP-1 -
Geobacter lovleyi SZ
Length = 109
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 249
L V +L Y T +DLRR+F G V ++I D T +S+G
Sbjct: 5 LYVGHLPYEATADDLRRMFSVAGTVTSVHIITDPATGKSKG 45
>UniRef50_Q9ZUJ3 Cluster: T2K10.5 protein; n=3; Magnoliophyta|Rep:
T2K10.5 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 258
Score = 34.7 bits (76), Expect = 1.7
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +1
Query: 28 NIVLFNLFDLS*ISILLKMSYG-RPPPRIDGMV-----SLKVDNLTYRTTPEDLRRVFER 189
NI++ NL + LK+++ +P P + + L V NL++ T E L F
Sbjct: 140 NIIIDNLDGTEYLGRALKVNFADKPKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRE 199
Query: 190 CGEVGDIYIPRDRYTRESRGFAS*GFSS 273
CG+V + D T SRG+ +SS
Sbjct: 200 CGDVVGARVVFDGDTGRSRGYGFVCYSS 227
>UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:
F3F9.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 302
Score = 34.7 bits (76), Expect = 1.7
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 85 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
SY R P + V L + T +++RR FE+ GE+ + I D+ T +S+G+
Sbjct: 5 SYYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGY 60
>UniRef50_A7P7U7 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 939
Score = 34.7 bits (76), Expect = 1.7
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
L V NL ++ +++ +F G V D +IP++ T SRGFA F+S
Sbjct: 269 LIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTS 317
>UniRef50_A7NYH5 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=12; Eukaryota|Rep: Chromosome chr6
scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 429
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
V + + T DL VF + GE+ D+ + RD+ T +S+GFA
Sbjct: 40 VGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFA 80
>UniRef50_A5BKF9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 246
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/24 (54%), Positives = 21/24 (87%)
Frame = +3
Query: 279 DAEEALDTMDGRMLDGRELRVQMA 350
+A++A+D +DGR++DGRE+ VQ A
Sbjct: 24 EAQKAVDRLDGRIVDGREITVQFA 47
>UniRef50_Q86EX2 Cluster: Clone ZZD1336 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD1336 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 210
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
SL + +L +DLRR F R G + D+ IP D +T +G+A
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYA 50
>UniRef50_Q5BYS2 Cluster: SJCHGC02231 protein; n=3; Schistosoma
japonicum|Rep: SJCHGC02231 protein - Schistosoma
japonicum (Blood fluke)
Length = 216
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L V NL Y T +L ++F G + DI++ D +++ S+GFA
Sbjct: 110 LFVRNLPYDCTENELEKLFSPYGPLSDIHLAFDSWSQVSKGFA 152
>UniRef50_Q1HE01 Cluster: Cbp20; n=6; Eukaryota|Rep: Cbp20 - Bombyx
mori (Silk moth)
Length = 154
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+L + NL++ TT E + ++ RCG++ + + D+Y + GF
Sbjct: 31 TLYMGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGF 73
>UniRef50_A2EJG8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 108
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 118 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDI-YIPRDRYTRESRGFAS 258
M + + NL++RTTP+DL R F GE+ + + +R + GF S
Sbjct: 1 MSQVSITNLSFRTTPDDLYRAFSPFGELTECRLVINERQESKGYGFIS 48
>UniRef50_A0DWV5 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 656
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDR 228
L V N+ Y +T ++L+ VFE+ G V I IP+ R
Sbjct: 193 LYVTNIPYTSTEQELKTVFEKYGTVSSIKIPKQR 226
>UniRef50_Q76IQ0 Cluster: Putative uncharacterized protein SGN1;
n=1; Candida glabrata|Rep: Putative uncharacterized
protein SGN1 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 144
Score = 34.7 bits (76), Expect = 1.7
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSV 276
S+ + N++ TTPE++ F+ CG + I + D+ T S G+A F S+
Sbjct: 46 SIYIGNISLDTTPEEIDEHFKSCGVIKRITMLYDKNTGPSIGYAYVEFDSI 96
>UniRef50_Q75E07 Cluster: ABL134Cp; n=1; Eremothecium gossypii|Rep:
ABL134Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 375
Score = 34.7 bits (76), Expect = 1.7
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +1
Query: 73 LLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L+ MS PP RI L V NL++ TT E L++ F+ CGE+ I + + + + +GF
Sbjct: 206 LISMSKN-PPSRI-----LFVGNLSFDTTDELLKKHFQHCGEIVKIRMATFQDSGKCKGF 259
Query: 253 A 255
A
Sbjct: 260 A 260
>UniRef50_Q5KPK3 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 287
Score = 34.7 bits (76), Expect = 1.7
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 100 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
PP ++ L V L+ RT DL F R G+V + I D+ T SRGF
Sbjct: 75 PPPVNPNPVLGVFGLSIRTRERDLEDEFMRYGDVEKVVIVYDQRTDRSRGF 125
>UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein
HRP1; n=1; Aspergillus fumigatus|Rep: Heterogeneous
nuclear ribonucleoprotein HRP1 - Aspergillus fumigatus
(Sartorya fumigata)
Length = 608
Score = 34.7 bits (76), Expect = 1.7
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKKPWT 300
+ L + TT + LR F + GEV + + RD T SRGF GF +T K P T
Sbjct: 109 IGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGF---GF---LTFKDPKT 158
>UniRef50_A7TPL8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 467
Score = 34.7 bits (76), Expect = 1.7
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
S+ V N+ + E L FE CGE+ + I RD T +GFA F + ++ K
Sbjct: 296 SIFVGNMDFEQDEETLWSHFESCGEIEYVRIIRDSKTNLGKGFAYIQFKDLQSVNK 351
>UniRef50_A5E774 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 334
Score = 34.7 bits (76), Expect = 1.7
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKKPWTR 303
S+ + N+ Y +TP +L++ F CG + + I +++T +G A F ++ K
Sbjct: 187 SIYIGNVDYGSTPLELQQHFSLCGIIEKVTILNNKFTGRPKGVAYLAFQDQESVDKAIA- 245
Query: 304 WTDECWTAGNFAFRWRDMVAPHRHTGV--VTIAGAG 405
T FR R++ H+ T + +TI G
Sbjct: 246 ------TLDGSIFRDRELKVMHKRTNIPGITIPRGG 275
>UniRef50_Q4PC17 Cluster: Multiple RNA-binding domain-containing
protein 1; n=1; Ustilago maydis|Rep: Multiple
RNA-binding domain-containing protein 1 - Ustilago
maydis (Smut fungus)
Length = 858
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFS 270
L + NL + + +++ FE G V ++IP D+ T+ S+G A FS
Sbjct: 316 LFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFS 363
>UniRef50_O04425 Cluster: Flowering time control protein FCA; n=10;
Brassicaceae|Rep: Flowering time control protein FCA -
Arabidopsis thaliana (Mouse-ear cress)
Length = 747
Score = 34.7 bits (76), Expect = 1.7
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVT 282
L V +L + T +++ +F + G V D+Y+ RD Y R+SRG +SS T
Sbjct: 213 LFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEY-RQSRGCGFVKYSSKET 263
>UniRef50_UPI0000E4A86C Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 352
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
L V L+ TT DLR V+E G + ++ + D T SRGFA
Sbjct: 116 LGVFGLSLYTTERDLRDVYEHYGTLTNVNVVYDHQTGRSRGFA 158
>UniRef50_UPI0000E47201 Cluster: PREDICTED: similar to
developmentally regulated RNA-binding protein 1; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
developmentally regulated RNA-binding protein 1 -
Strongylocentrotus purpuratus
Length = 507
Score = 34.3 bits (75), Expect = 2.2
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
T DL+ F + GEV D+++ +D+ TRE +G A
Sbjct: 39 TESDLKDYFGQFGEVEDVFLVKDKVTREPKGVA 71
>UniRef50_UPI0000D9F579 Cluster: PREDICTED: similar to
testes-specific heterogenous nuclear ribonucleoprotein
G-T; n=1; Macaca mulatta|Rep: PREDICTED: similar to
testes-specific heterogenous nuclear ribonucleoprotein
G-T - Macaca mulatta
Length = 415
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLK 288
L V L +T + L+ F + G + ++++ +DR T +SRGFA F S K
Sbjct: 10 LFVGGLNLKTEEKALKAEFVKYGRIINVFLMKDRETNKSRGFAFVTFESPADAK 63
>UniRef50_UPI0000D5737C Cluster: PREDICTED: similar to RNA binding
motif protein 24; n=3; Endopterygota|Rep: PREDICTED:
similar to RNA binding motif protein 24 - Tribolium
castaneum
Length = 318
Score = 34.3 bits (75), Expect = 2.2
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
L V L Y TT + LR F GE+ + + DR T +SRG+
Sbjct: 91 LFVGGLPYHTTDQSLREHFSVYGEIEEAVVITDRQTGKSRGY 132
>UniRef50_UPI00005A4DCF Cluster: PREDICTED: similar to Heterogeneous
nuclear ribonucleoprotein A1 (Helix-destabilizing
protein) (Single-strand binding protein) (hnRNP core
protein A1) (HDP-1) (Topoisomerase-inhibitor
suppressed); n=2; Canis lupus familiaris|Rep: PREDICTED:
similar to Heterogeneous nuclear ribonucleoprotein A1
(Helix-destabilizing protein) (Single-strand binding
protein) (hnRNP core protein A1) (HDP-1)
(Topoisomerase-inhibitor suppressed) - Canis familiaris
Length = 433
Score = 34.3 bits (75), Expect = 2.2
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
+ L+++TT E LR FE+ G + D RD T+ SRGF GF T+++
Sbjct: 59 ISGLSFKTTYETLRSHFEQWGMLIDCVAMRDPNTKLSRGF---GFVMYATMEE 108
>UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10273.1 - Gibberella zeae PH-1
Length = 552
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTL 285
+ L + TT + LR F + GEV + + RD T SRGF F T+
Sbjct: 125 IGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTV 175
>UniRef50_Q7MWI3 Cluster: RNA-binding protein; n=5;
Bacteroidetes/Chlorobi group|Rep: RNA-binding protein -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 97
Score = 34.3 bits (75), Expect = 2.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 121 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+++ V NL YR EDL + ++ G V + DR T SRGF
Sbjct: 3 MNIYVGNLNYRVREEDLTGLLQQYGAVTSARVITDRETGRSRGF 46
>UniRef50_Q74DJ2 Cluster: RNA-binding protein; n=2; Geobacter|Rep:
RNA-binding protein - Geobacter sulfurreducens
Length = 107
Score = 34.3 bits (75), Expect = 2.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 249
L V +++Y T +DLRR+F G V ++I D T S+G
Sbjct: 5 LYVGHMSYEATEDDLRRLFSVAGTVTSVHIITDPETGRSKG 45
>UniRef50_A0HBM8 Cluster: RNA-binding region RNP-1; n=1; Comamonas
testosteroni KF-1|Rep: RNA-binding region RNP-1 -
Comamonas testosteroni KF-1
Length = 83
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+L V NL Y E L+ F CG+V + DR T +SRGF
Sbjct: 4 NLYVSNLGYGVDRETLKSHFSSCGDVLSSEVITDRNTGQSRGF 46
>UniRef50_Q9FX45 Cluster: RNA-binding glycine-rich protein,
putative; n=1; Arabidopsis thaliana|Rep: RNA-binding
glycine-rich protein, putative - Arabidopsis thaliana
(Mouse-ear cress)
Length = 181
Score = 34.3 bits (75), Expect = 2.2
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 SILLKMSYGRPPPRIDG-MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 243
S L S PP G L V L++RTT + LR FE+ G + + + D+
Sbjct: 58 SCLSTDSSSSPPSSSSGPKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRP 117
Query: 244 RGFA 255
+GFA
Sbjct: 118 KGFA 121
>UniRef50_Q8RWQ1 Cluster: At2g44720/F16B22.21; n=5;
Magnoliophyta|Rep: At2g44720/F16B22.21 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 809
Score = 34.3 bits (75), Expect = 2.2
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +1
Query: 133 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSSVVTLKK 291
V +L + EDL++VF GEV ++ I ++ T++S+G A F++V K+
Sbjct: 218 VGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAKR 270
>UniRef50_Q67XI5 Cluster: Putative uncharacterized protein
At4g20030; n=3; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At4g20030 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 152
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 127 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAS*GFSS 273
+ V NL + T+ + L+R F GE+ ++ + +D + S+G+A F+S
Sbjct: 42 IMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTS 90
>UniRef50_Q5JJM4 Cluster: Peptidylprolyl cis-trans isomerase-like
protein; n=3; Eukaryota|Rep: Peptidylprolyl cis-trans
isomerase-like protein - Oryza sativa subsp. japonica
(Rice)
Length = 698
Score = 34.3 bits (75), Expect = 2.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 124 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+L V +Y TT DL + F + G V + RD+ + +SRGF
Sbjct: 618 NLFVAGFSYATTERDLEKKFSKYGRVTSARVVRDKRSGDSRGF 660
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,774,380
Number of Sequences: 1657284
Number of extensions: 9894426
Number of successful extensions: 29288
Number of sequences better than 10.0: 389
Number of HSP's better than 10.0 without gapping: 27909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29248
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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