Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0287
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    27   0.091
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 0.091
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
 Frame = -2

Query: 465 CANGC-GYDCASNYXGGNETWTCACDRNDSCMAMRGDHIAPSEREVPCRPTFVRPSCPGL 289
           C +G  GY C  N    ++    AC  N +C+   G        E  C P FV P C G 
Sbjct: 248 CPSGTLGYICEINV---DDCRPGACHNNGTCLDKVGGF------ECKCPPGFVGPRCEGD 298

Query: 288 LQRHDARKTSRSESSTFPCVPI 223
           +  ++      S + T  CV +
Sbjct: 299 I--NECLSNPCSNAGTLDCVQL 318


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
 Frame = -2

Query: 546 FQCLDRE-RERLCDGNVPWNSLSQSESDCANGCGYDCASNYXGGNETWTCACDRNDSCMA 370
           ++C D +  E+LC   + +N  S     C      DC S         +  C R     A
Sbjct: 56  YECNDGQITEKLCPDGMVFNDYSSEYEKCDLPFNIDCTSRPKLQEPQPSQHCPRKHGYFA 115

Query: 369 MRGDHI 352
               HI
Sbjct: 116 HEEPHI 121


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 343 RWRDMVAPHRHTGVV 387
           RWRD +    H+GVV
Sbjct: 310 RWRDRIYDAIHSGVV 324


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 259 TKRILYFPLCTDLWECRYHQLLRTFRKRGVSLQAS 155
           T    +F +C D        ++  FRKR V+ + S
Sbjct: 72  THIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDS 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,355
Number of Sequences: 336
Number of extensions: 2439
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)