Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0286
(608 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 179 1e-45
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 179 1e-45
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 178 3e-45
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 175 1e-44
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 174 4e-44
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 173 8e-44
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 173 1e-43
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 171 3e-43
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 171 3e-43
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 97 1e-20
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 97 1e-20
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 96 2e-20
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 96 2e-20
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 96 2e-20
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 96 2e-20
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 94 7e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 69 2e-12
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 69 2e-12
At4g37190.1 68417.m05265 expressed protein 30 1.0
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 29 1.8
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 1.8
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 1.8
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 2.4
At1g69500.1 68414.m07986 cytochrome P450 family protein similar ... 27 7.4
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 27 7.4
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 7.4
At3g45750.1 68416.m04944 expressed protein 27 9.7
At3g02125.1 68416.m00179 hypothetical protein 27 9.7
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 27 9.7
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 27 9.7
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 179 bits (436), Expect = 1e-45
Identities = 79/88 (89%), Positives = 85/88 (96%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVY+NEASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAEL+DSVLDVVRKEAE CDC + F
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL 44
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 179 bits (436), Expect = 1e-45
Identities = 78/88 (88%), Positives = 85/88 (96%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEASGG+YVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 47 RINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 106
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAEL+D+VLDVVRKEAE CDC + F
Sbjct: 107 YTEGAELIDAVLDVVRKEAENCDCLQGF 134
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/45 (82%), Positives = 41/45 (91%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQL 254
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD +DLQL
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQL 45
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 178 bits (433), Expect = 3e-45
Identities = 77/88 (87%), Positives = 85/88 (96%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEASGG+YVPRAV++DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 47 RINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 106
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAEL+D+VLDVVRKEAE CDC + F
Sbjct: 107 YTEGAELIDAVLDVVRKEAENCDCLQGF 134
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/45 (77%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQL 254
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQL
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQL 45
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 175 bits (427), Expect = 1e-44
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
R+NVYYNEAS G+YVPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAEL+DSVLDVVRKEAE CDC + F
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 80.6 bits (190), Expect = 7e-16
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQL
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL 44
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 174 bits (423), Expect = 4e-44
Identities = 76/88 (86%), Positives = 84/88 (95%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
R+NVYYNEAS G++VPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAEL+DSVLDVVRKEAE CDC + F
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 82.2 bits (194), Expect = 2e-16
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL 44
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 173 bits (421), Expect = 8e-44
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RI+VY+NEASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAEL+DSVLDVVRKEAE DC + F
Sbjct: 106 YTEGAELIDSVLDVVRKEAENSDCLQGF 133
Score = 83.8 bits (198), Expect = 8e-17
Identities = 37/44 (84%), Positives = 38/44 (86%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL 44
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 173 bits (420), Expect = 1e-43
Identities = 74/88 (84%), Positives = 84/88 (95%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
R+NVYYNEAS G+YVPRA+++DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RVNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAEL+D+VLDVVRKEAE CDC + F
Sbjct: 106 YTEGAELIDAVLDVVRKEAENCDCLQGF 133
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQL
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQL 44
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 171 bits (416), Expect = 3e-43
Identities = 75/88 (85%), Positives = 83/88 (94%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAEL+DSVLDVVRKEAE CDC + F
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL 44
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 171 bits (416), Expect = 3e-43
Identities = 75/88 (85%), Positives = 83/88 (94%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVF 520
YTEGAEL+DSVLDVVRKEAE CDC + F
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGF 133
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL 44
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.7 bits (230), Expect = 1e-20
Identities = 41/80 (51%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD VRK A+ C
Sbjct: 110 VGKEIVDLCLDRVRKLADNC 129
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 242
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.7 bits (230), Expect = 1e-20
Identities = 41/80 (51%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD VRK A+ C
Sbjct: 110 VGKEIVDLCLDRVRKLADNC 129
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 242
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD +RK A+ C
Sbjct: 110 IGKEIVDLCLDRIRKLADNC 129
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD +RK A+ C
Sbjct: 110 IGKEIVDLCLDRIRKLADNC 129
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD +RK A+ C
Sbjct: 110 IGKEIVDLCLDRIRKLADNC 129
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD +RK A+ C
Sbjct: 110 IGKEIVDLCLDRIRKLADNC 129
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.9 bits (223), Expect = 7e-20
Identities = 38/80 (47%), Positives = 58/80 (72%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E S G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD+ L+ +RK A+ C
Sbjct: 110 VGREIVDTCLERLRKLADNC 129
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 242
MREI+ I GQ G Q+G WE+ EHGI G DS
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDS 40
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAK 430
R +V++ +A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 47 RKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWAS 106
Query: 431 GHYTEGAELVDSVLDVVRKEAEGCDCCRVF 520
G Y +G + + ++D++ +EA+G D F
Sbjct: 107 G-YHQGKGVEEEIMDMIDREADGSDSLEGF 135
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 68.9 bits (161), Expect = 2e-12
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAK 430
R +V++ +A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 47 RKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWAS 106
Query: 431 GHYTEGAELVDSVLDVVRKEAEGCDCCRVF 520
G Y +G + + ++D++ +EA+G D F
Sbjct: 107 G-YHQGKGVEEEIMDMIDREADGSDSLEGF 135
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFW 185
MREIV IQ G+ N +G+ FW
Sbjct: 1 MREIVTIQVGEFANFVGSHFW 21
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 129 EIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTI 275
+I++ A + G+ GA FWEVIS + ++G S + L+ ST+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVIS-----EGMSNFAGPSSIILSDKSSTV 389
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 455 LVDSVLDVVRKEAEGCDCCRVF 520
+++SV VVRKEAE C+C +VF
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 185 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 96
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -1
Query: 473 PVPNQPVQPPLCNVLSP-SYSPPQTVRRRSCPVGRFAQ---TARNGRSPWFQAQGPPSQL 306
P P+ P+ P L P S +PP S P+ T N RSP QGPP+
Sbjct: 54 PPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNTP 113
Query: 305 AGRT 294
+G T
Sbjct: 114 SGST 117
>At1g69500.1 68414.m07986 cytochrome P450 family protein similar to
Cytochrome P450 86A2 (SP:O23066) [Arabidopsis
thaliana]contains Pfam profile: PF00067: Cytochrome P450
Length = 478
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 476 HPVPNQPVQPPLCNVLSPSYSPPQTVRRRS 387
H VPN PV+ + +LS ++ TV RRS
Sbjct: 449 HLVPNHPVKYRMMTILSMAHGLKVTVSRRS 478
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 473 PVPNQPVQPPLCNVLSPSYSPP 408
PV +P PP SPSYSPP
Sbjct: 169 PVYTKPTLPPPVYKKSPSYSPP 190
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 414 PAPDCPKTKLSGRKICPNGPERTESMVPG-SRSTITARGT 298
PAP P L ICP+G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At3g45750.1 68416.m04944 expressed protein
Length = 682
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 509 NNRSLLLLF*LH-PVPNQPVQPPLCNVLSPSYSPPQTVRR 393
N+ S+ LL LH N P+ PP +L PP +R
Sbjct: 220 NSVSITLLVALHLQTQNPPILPPFSMLLKDGMDPPNVEKR 259
>At3g02125.1 68416.m00179 hypothetical protein
Length = 355
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 467 PNQPVQP-PLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQ 309
P Q +QP N+L+ S PQ R+ S Q+ + R+ WF PS+
Sbjct: 297 PQQQLQPYSESNMLTESQPEPQPQRKASKKFESRTQSLKASRTCWFSCFHCPSK 350
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 476 HPVPNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQLA 303
+P P QP PP+ + P+Y P++V S P T + P++ PP Q A
Sbjct: 760 YPPPMQPPPPPMNSGYMPTYI-PKSVNDSSMPNPPMNNTNPQMQQPYYP---PPMQPA 813
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 473 PVPNQPVQPPLCNVLSPSYSPPQTVRRRSCPVG 375
P P+ PP+ + P++SPP T P+G
Sbjct: 619 PPPSHSPPPPVYSPPPPTFSPPPTHNTNQPPMG 651
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,009,436
Number of Sequences: 28952
Number of extensions: 309060
Number of successful extensions: 1098
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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