Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0283
         (349 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626...    26   7.1  

>12_02_0973 +
           24959440-24959451,24959962-24962195,24962539-24962653,
           24963146-24963943,24964140-24964422,24964500-24964951,
           24965744-24965870,24965950-24966074,24966188-24966858,
           24966976-24967093,24967177-24967293,24967564-24967658,
           24968152-24968303,24968858-24968913,24969001-24969218,
           24969842-24970239,24970345-24970628,24970730-24970836,
           24970882-24970968,24971729-24971990,24972228-24972503,
           24973197-24973254,24973437-24973756,24973889-24973999,
           24974183-24974350,24974494-24974622,24974731-24974820,
           24974934-24975040,24975133-24975281,24975584-24975666,
           24975749-24975844,24975957-24976079,24976180-24976263,
           24976371-24976511,24976652-24976951,24977386-24977453,
           24977540-24977642,24979363-24979524,24979613-24981230,
           24981270-24981661,24981689-24981991,24982078-24982161,
           24982296-24982448,24982678-24982841,24982915-24983062,
           24983209-24983331,24983409-24983496,24983686-24983867
          Length = 4177

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 142 HKQVA*LRLLKTTMGKISLFFLALIASSVMALYRVPLHV*KLREPT 279
           +K  +  +  + T+G+++L    L ASS   LYR  +H  +L+E T
Sbjct: 520 YKSTSGFQQCRFTVGRVNLDVDYLCASSTYLLYRQFVHYKELKELT 565


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,331,870
Number of Sequences: 37544
Number of extensions: 136800
Number of successful extensions: 193
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)