Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0283
         (349 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   1.9  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   4.3  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/35 (22%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = -1

Query: 112 IKIEHCDRNVLSIEKQRSK-**KQIKLCHKSPDII 11
           + +E+C++++++I+KQ+ +   ++ +L H+  ++I
Sbjct: 351 LMVEYCEQDIITIDKQKCEAKDREEQLLHEKQNLI 385


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 6   FSMMSGDL*HNLICFYYLLRCFSIDKTL 89
           F++M GDL H LI F   +     +KTL
Sbjct: 398 FAIMFGDLGHGLILFLLGMWMVLWEKTL 425


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,877
Number of Sequences: 2352
Number of extensions: 5254
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)