Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0283
         (349 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81557-3|CAB04534.1|   99|Caenorhabditis elegans Hypothetical pr...    27   2.8  
Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical p...    27   3.7  
Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical p...    27   3.7  

>Z81557-3|CAB04534.1|   99|Caenorhabditis elegans Hypothetical
           protein F59A1.6 protein.
          Length = 99

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 51  YYLLRCFSIDKTLRSQCSILIN 116
           Y  L CF + KTL+ +C  L+N
Sbjct: 50  YMNLACFQLHKTLKPKCMALVN 71


>Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 347 FG*RPSHIVF*SQQLQFSANLMKVGSRSFHTCNGTLYSA 231
           +G  P H+   +Q  QF++ L+++G+     C G  + A
Sbjct: 200 YGLSPLHLAIVNQDAQFTSLLLRLGADLNQRCYGAFFCA 238


>Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 347 FG*RPSHIVF*SQQLQFSANLMKVGSRSFHTCNGTLYSA 231
           +G  P H+   +Q  QF++ L+++G+     C G  + A
Sbjct: 200 YGLSPLHLAIVNQDAQFTSLLLRLGADLNQRCYGAFFCA 238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,479,094
Number of Sequences: 27780
Number of extensions: 131049
Number of successful extensions: 278
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)