Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0283
         (349 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g59300.1 68416.m06610 expressed protein hypothetical protein ...    29   0.85 
At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putativ...    27   4.5  
At2g27490.2 68415.m03323 dephospho-CoA kinase family similar to ...    26   6.0  
At2g27490.1 68415.m03322 dephospho-CoA kinase family similar to ...    26   6.0  
At5g16900.1 68418.m01981 leucine-rich repeat protein kinase, put...    26   7.9  

>At3g59300.1 68416.m06610 expressed protein hypothetical protein
           T2J13.20 - Arabidopsis thaliana, PIR:T46116
          Length = 459

 Score = 29.1 bits (62), Expect = 0.85
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -2

Query: 342 VKAQSHRILISTAPVQCQPHE-SGFSQFSYV 253
           V+A S  +L+    + C+PH+ + +S+F YV
Sbjct: 124 VEANSSAVLVFPGAIHCEPHDHNSWSEFKYV 154


>At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putative
           similar to plastidic aldolase NPALDP1 from Nicotiana
           paniculata [GI:4827251]; contains Pfam profile PF00274
           Fructose-bisphosphate aldolase class-I
          Length = 391

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = -1

Query: 343 GEGPVTSYFNLNSSSSVPTS*KWVLAVFIRVMAPYIVPLRSWRSAPKKIXISFPLLFLEA 164
           G+    +  NLN+ +  P    W ++ F    A     LR+W+  P+KI  S   L + A
Sbjct: 304 GQSEAEATLNLNAMNQSPNP--WHVS-FSYARALQNSVLRTWQGKPEKIEASQKALLVRA 360

Query: 163 ATRRLA 146
               LA
Sbjct: 361 KANSLA 366


>At2g27490.2 68415.m03323 dephospho-CoA kinase family similar to
           Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A
           kinase). (Swiss-Prot:Q92BF2) [Listeria innocua];
           contains Pfam profile PF01121: Dephospho-CoA kinase
          Length = 232

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = -1

Query: 256 RVMAPYIVP------LRSWRSAPKKIXISFPLLF 173
           ++MAPYI        L+ W S  K I +  PLLF
Sbjct: 85  KLMAPYISSGIFWEILKQWASGAKVIVVDIPLLF 118


>At2g27490.1 68415.m03322 dephospho-CoA kinase family similar to
           Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A
           kinase). (Swiss-Prot:Q92BF2) [Listeria innocua];
           contains Pfam profile PF01121: Dephospho-CoA kinase
          Length = 232

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = -1

Query: 256 RVMAPYIVP------LRSWRSAPKKIXISFPLLF 173
           ++MAPYI        L+ W S  K I +  PLLF
Sbjct: 85  KLMAPYISSGIFWEILKQWASGAKVIVVDIPLLF 118


>At5g16900.1 68418.m01981 leucine-rich repeat protein kinase,
           putative similar to light repressible receptor protein
           kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
           contains leucine rich repeat (LRR) domains,
           Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 866

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 20/78 (25%), Positives = 37/78 (47%)
 Frame = -1

Query: 337 GPVTSYFNLNSSSSVPTS*KWVLAVFIRVMAPYIVPLRSWRSAPKKIXISFPLLFLEAAT 158
           GP  S    N  ++V       +A+FI V+   IV ++   S+ + +  S   L LE   
Sbjct: 502 GPCNSSSG-NKETTVIAPVAAAIAIFIAVLVLIIVFIKKRPSSIRALHPSRANLSLENKK 560

Query: 157 RRLAYEKLTIVIY*FIKI 104
           RR+ Y ++ ++   F ++
Sbjct: 561 RRITYSEILLMTNNFERV 578


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,878,359
Number of Sequences: 28952
Number of extensions: 116364
Number of successful extensions: 199
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)