Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0277
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.9  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 328 QCRSLLQHKTQQTCKDRRNRPSR 260
           QCRS+     + TC +  +RP R
Sbjct: 81  QCRSIKNECPEPTCDEPVHRPGR 103


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 558 NKQICQNTIHTRLWLRGTSFA 496
           ++Q  + ++ TRLW R  +FA
Sbjct: 556 SEQFDETSLDTRLWPRAAAFA 576


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 558 NKQICQNTIHTRLWLRGTSFA 496
           ++Q+  +++ TR+W R  +FA
Sbjct: 514 SEQVGPDSLETRIWPRSAAFA 534


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -1

Query: 198 CHSVLSCKS 172
           CH VLSCKS
Sbjct: 140 CHRVLSCKS 148


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 365 LAAESLEINIKNKMFC 412
           LAAES++  + N +FC
Sbjct: 99  LAAESIDDLLSNAVFC 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,375
Number of Sequences: 336
Number of extensions: 3919
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)