Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0268
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.4  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 374 VSWYHGDACKRXSAHLRKTVRFTMVYLVSC 285
           VSWY GDA  R     R    +   +++ C
Sbjct: 117 VSWYAGDAMCRIMMFFRMFGLYLSSFILVC 146


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 374 VSWYHGDACKRXSAHLRKTVRFTMVYLVSC 285
           VSWY GDA  R     R    +   +++ C
Sbjct: 117 VSWYAGDAMCRIMMFFRMFGLYLSSFILVC 146


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 109 FPGVHGSLSPSTSIGSAI 162
           FP +H S++P    G A+
Sbjct: 243 FPSIHNSINPFLGQGFAV 260


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 542 GFMDNGGSGLTNLQEPTQCSA 480
           G +D+GGSG    + P   S+
Sbjct: 409 GVIDDGGSGQNQPESPESSSS 429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,979
Number of Sequences: 336
Number of extensions: 3217
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)