Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0268
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   2.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   2.6  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    24   3.4  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 442 ISELFRRLAETLKPYGT*PENPSY 371
           I + FR     L P GT P NP+Y
Sbjct: 407 IDDDFRHNCRPLTPGGTLPHNPTY 430


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 346 NGDPPIYGKPCVSRWSISFLVAGTVR 269
           +G PP   + C++  SI F+ AG+ R
Sbjct: 7   DGPPPTRKRYCINSASIEFMPAGSER 32


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 108 IPWGTRVIVPEYKYRIGDTYGLXKHTRXLLDPER 209
           +PWG +    E  YR+ D +G    +  L+   R
Sbjct: 234 VPWGFQYRPRELAYRLADRFGYSHDSATLVQSLR 267


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,246
Number of Sequences: 2352
Number of extensions: 13137
Number of successful extensions: 72
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)