Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0268
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.8  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.4  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.8  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 78  LSXVXPNPHYIPWGTRVIVPEYKYR 152
           L  V P+  + P+ TRV+    KYR
Sbjct: 236 LGYVMPDRTFAPFFTRVVTDTIKYR 260


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 422 SSKKLTNSALCDFSSNYRRRQSTEWAPVN 508
           +S ++ N+   +  SNYR  +  +  P N
Sbjct: 380 ASSRMENNLRGETQSNYREMEKRQSVPAN 408


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 390 DPKTLRILVSWG 355
           DPK    L+SWG
Sbjct: 206 DPKKTPFLISWG 217


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 390 DPKTLRILVSWG 355
           DPK    L+SWG
Sbjct: 206 DPKKTPFLISWG 217


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,690
Number of Sequences: 438
Number of extensions: 4093
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)