Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0267
(598 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 25 0.37
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 0.37
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 0.37
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 25 0.37
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 24 0.85
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 24 0.85
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 24 0.85
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 23 2.0
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 23 2.6
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 3.4
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 21 7.9
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 7.9
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 25.4 bits (53), Expect = 0.37
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 253 EYRRNGQIPPVSRITRDHHVFGXEHLQXQLGY 158
EY +N IPP +HH+ + Q Q GY
Sbjct: 36 EYNQNSYIPPGGDFFGNHHI---QQQQLQYGY 64
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 25.4 bits (53), Expect = 0.37
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 253 EYRRNGQIPPVSRITRDHHVFGXEHLQXQLGY 158
EY +N IPP +HH+ + Q Q GY
Sbjct: 36 EYNQNSYIPPGGDFFGNHHI---QQQQLQYGY 64
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 25.4 bits (53), Expect = 0.37
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 253 EYRRNGQIPPVSRITRDHHVFGXEHLQXQLGY 158
EY +N IPP +HH+ + Q Q GY
Sbjct: 36 EYNQNSYIPPGGDFFGNHHI---QQQQLQYGY 64
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 25.4 bits (53), Expect = 0.37
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 253 EYRRNGQIPPVSRITRDHHVFGXEHLQXQLGY 158
EY +N IPP +HH+ + Q Q GY
Sbjct: 36 EYNQNSYIPPGGDFFGNHHI---QQQQLQYGY 64
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 24.2 bits (50), Expect = 0.85
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 320 YVLFLF*IFASCSSTSFIDI--RP*ISSQRSNTSRVEDHTR 204
Y LFL +F CS + ++I R ++ + N S+V+ TR
Sbjct: 291 YCLFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATR 331
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 24.2 bits (50), Expect = 0.85
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 320 YVLFLF*IFASCSSTSFIDI--RP*ISSQRSNTSRVEDHTR 204
Y LFL +F CS + ++I R ++ + N S+V+ TR
Sbjct: 291 YCLFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATR 331
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 24.2 bits (50), Expect = 0.85
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 320 YVLFLF*IFASCSSTSFIDI--RP*ISSQRSNTSRVEDHTR 204
Y LFL +F CS + ++I R ++ + N S+V+ TR
Sbjct: 291 YCLFLLFVFCDCSHQASLNIARRVQVTLLQVNLSQVDPATR 331
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 23.0 bits (47), Expect = 2.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 330 LDKIRAVFVLNIRQLLVNFFHRHS 259
L +R VFV + LVNF HR S
Sbjct: 10 LHSVRIVFVQSEIFCLVNFNHRES 33
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 22.6 bits (46), Expect = 2.6
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = +1
Query: 331 WIPNNCKIAVCDIP 372
W+P++CK+ ++P
Sbjct: 493 WVPHSCKLTSKEVP 506
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 386 KWLRPSLVTRRPYRPYSRGCLSS 454
++L PSL RP PY + ++S
Sbjct: 23 RYLPPSLSDTRPMLPYPQNYINS 45
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = +1
Query: 91 AFLHPWLCAADVARSSTVSSFXCT 162
AF PWL + + F CT
Sbjct: 16 AFSRPWLLQGHIRTHTGEKPFSCT 39
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 401 SLVTRRPYRPYSRGCLSSSWLCLGGKPS 484
+LVT RP +R C + L L G S
Sbjct: 237 ALVTSPRARPLARTCRDNRLLVLAGTSS 264
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,136
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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