Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0267
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 181 4e-46
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 171 2e-43
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 171 2e-43
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 171 2e-43
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 169 1e-42
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 169 1e-42
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 95 4e-20
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 95 4e-20
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 91 7e-19
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 91 7e-19
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 91 7e-19
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 91 7e-19
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 90 1e-18
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 90 1e-18
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 90 1e-18
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 90 1e-18
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 87 7e-18
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 87 7e-18
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 87 7e-18
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 85 5e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 81 6e-16
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 81 8e-16
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 81 8e-16
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 81 8e-16
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 38 0.004
U53342-2|AAA96214.1| 272|Caenorhabditis elegans Suppressor of a... 29 1.9
U53342-1|AAA96213.2| 371|Caenorhabditis elegans Suppressor of a... 29 2.5
AL024499-2|CAB54260.2| 242|Caenorhabditis elegans Hypothetical ... 28 4.4
AL024499-1|CAB54261.2| 295|Caenorhabditis elegans Hypothetical ... 28 4.4
U00066-4|AAM54165.2| 75|Caenorhabditis elegans Hypothetical pr... 28 5.8
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 181 bits (440), Expect = 4e-46
Identities = 100/200 (50%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSRG+QQYR+L VPEL QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQM 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP- 358
F AKNMM ACDPRHGRYLTVA +FRG K++ + K + P +
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAV 353
Query: 359 CVTYLRGVLKWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKPSCTGTLXXXXXXXXXXXQS 538
C RGV K + + + K
Sbjct: 354 CDIPPRGV-KMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
Query: 539 SNMNXLISEYQQYQDATADD 598
SNMN L+SEYQQYQ+ATADD
Sbjct: 413 SNMNDLVSEYQQYQEATADD 432
Score = 161 bits (392), Expect = 3e-40
Identities = 71/95 (74%), Positives = 82/95 (86%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+GRMSMKEVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRG+KMA+TF+GN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQEL 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGXGRMKWSSRXAE 537
FKR+SEQF AMFRRKAFLHWYTG G + AE
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 171 bits (417), Expect = 2e-43
Identities = 96/200 (48%), Positives = 113/200 (56%), Gaps = 1/200 (0%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPL+++GAQ YRAL V EL QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQM 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP- 358
F AKNMM ACDPRHGRYLTVA +FRG +++ + K + P +
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAV 353
Query: 359 CVTYLRGVLKWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKPSCTGTLXXXXXXXXXXXQS 538
C RG LK + + + K
Sbjct: 354 CDIPPRG-LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
Query: 539 SNMNXLISEYQQYQDATADD 598
SNMN LISEYQQYQ+ATA+D
Sbjct: 413 SNMNDLISEYQQYQEATAED 432
Score = 159 bits (387), Expect = 1e-39
Identities = 70/95 (73%), Positives = 82/95 (86%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+GRMSM+EVDEQ+ ++QNKNS+YFVEWIPNN K AVCDIPPRGLKMA+TF+GN+TAIQ +
Sbjct: 318 RGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQEL 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGXGRMKWSSRXAE 537
FKR+SEQF AMFRRKAFLHWYTG G + AE
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 171 bits (417), Expect = 2e-43
Identities = 96/200 (48%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSR QQYRA+ VPEL Q
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQC 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP- 358
F AKNMM ACDPRHGRYLT A IFRG K++ + K + P +
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAV 353
Query: 359 CVTYLRGVLKWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKPSCTGTLXXXXXXXXXXXQS 538
C RG LK + + + K
Sbjct: 354 CDIPPRG-LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
Query: 539 SNMNXLISEYQQYQDATADD 598
SNMN L+SEYQQYQ+A AD+
Sbjct: 413 SNMNDLVSEYQQYQEAAADE 432
Score = 161 bits (391), Expect = 3e-40
Identities = 72/95 (75%), Positives = 82/95 (86%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+GRMSMKEVDEQ+ NIQNKNS+YFV+WIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGXGRMKWSSRXAE 537
FKR+SEQF AMFRRKAFLHWYTG G + AE
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 171 bits (417), Expect = 2e-43
Identities = 96/200 (48%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPLTSR QQYRA+ VPEL Q
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQC 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP- 358
F AKNMM ACDPRHGRYLT A IFRG K++ + K + P +
Sbjct: 294 FDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAV 353
Query: 359 CVTYLRGVLKWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKPSCTGTLXXXXXXXXXXXQS 538
C RG LK + + + K
Sbjct: 354 CDIPPRG-LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
Query: 539 SNMNXLISEYQQYQDATADD 598
SNMN L+SEYQQYQ+A AD+
Sbjct: 413 SNMNDLVSEYQQYQEAAADE 432
Score = 161 bits (391), Expect = 3e-40
Identities = 72/95 (75%), Positives = 82/95 (86%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+GRMSMKEVDEQ+ NIQNKNS+YFV+WIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGXGRMKWSSRXAE 537
FKR+SEQF AMFRRKAFLHWYTG G + AE
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 169 bits (412), Expect = 1e-42
Identities = 94/200 (47%), Positives = 113/200 (56%), Gaps = 1/200 (0%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPL+++GAQ YRAL V EL QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQAYRALTVAELTQQM 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP- 358
F AKNMM ACDPRHGRYLTVA +FRG +++ + K + P +
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAV 353
Query: 359 CVTYLRGVLKWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKPSCTGTLXXXXXXXXXXXQS 538
C RG LK + + + K
Sbjct: 354 CDIPPRG-LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
Query: 539 SNMNXLISEYQQYQDATADD 598
SNMN L+SEYQQYQ+ATA++
Sbjct: 413 SNMNDLVSEYQQYQEATAEE 432
Score = 159 bits (387), Expect = 1e-39
Identities = 70/95 (73%), Positives = 82/95 (86%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+GRMSM+EVD+Q+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKM++TFIGN+TAIQ +
Sbjct: 318 RGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQEL 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGXGRMKWSSRXAE 537
FKR+SEQF AMFRRKAFLHWYTG G + AE
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 169 bits (412), Expect = 1e-42
Identities = 95/200 (47%), Positives = 112/200 (56%), Gaps = 1/200 (0%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
SG+TTCLRFPGQLNADLRKLAVNMVPFPRLHF+ PGFAPL+++G Q YRAL V EL QM
Sbjct: 234 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQM 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTARILSSGYPITARLP- 358
F AKNMM ACDPRHGRYLTVA +FRG +++ + K + P +
Sbjct: 294 FDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAV 353
Query: 359 CVTYLRGVLKWLRPSLVTRRPYRPYSRGCLSSSWLCLGGKPSCTGTLXXXXXXXXXXXQS 538
C RG LK + + + K
Sbjct: 354 CDIPPRG-LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
Query: 539 SNMNXLISEYQQYQDATADD 598
SNMN LISEYQQYQ+ATA+D
Sbjct: 413 SNMNDLISEYQQYQEATAED 432
Score = 161 bits (392), Expect = 3e-40
Identities = 71/95 (74%), Positives = 82/95 (86%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+GRMSM+EVDEQ+ N+QNKNS+YFVEWIPNN K AVCDIPPRGLKMA+TF+GN+TAIQ +
Sbjct: 318 RGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQEL 377
Query: 433 FKRVSEQFVAMFRRKAFLHWYTGXGRMKWSSRXAE 537
FKR+SEQF AMFRRKAFLHWYTG G + AE
Sbjct: 378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 94.7 bits (225), Expect = 4e-20
Identities = 40/82 (48%), Positives = 60/82 (73%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+ + K+ EQ+ +++N++ + +E +P + VCDIP RGLK ++TFI N+TAIQ
Sbjct: 316 RGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEP 375
Query: 433 FKRVSEQFVAMFRRKAFLHWYT 498
KR+S+QF +FRRKAFLHWYT
Sbjct: 376 LKRISKQFAGLFRRKAFLHWYT 397
Score = 72.5 bits (170), Expect = 2e-13
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
SGITT RF G L D+RKL N PRLHF+ FAP+ +G +A + +L Q+
Sbjct: 235 SGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQV 292
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KK 277
AKN+M C+ G++L+ A I+RG+ KK
Sbjct: 293 LDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKK 323
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 94.7 bits (225), Expect = 4e-20
Identities = 40/82 (48%), Positives = 60/82 (73%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPRGLKMASTFIGNTTAIQTI 432
+G+ + K+ EQ+ +++N++ + +E +P + VCDIP RGLK ++TFI N+TAIQ
Sbjct: 316 RGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEP 375
Query: 433 FKRVSEQFVAMFRRKAFLHWYT 498
KR+S+QF +FRRKAFLHWYT
Sbjct: 376 LKRISKQFAGLFRRKAFLHWYT 397
Score = 72.5 bits (170), Expect = 2e-13
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
SGITT RF G L D+RKL N PRLHF+ FAP+ +G +A + +L Q+
Sbjct: 235 SGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIIDCQAFSISDLTQQV 292
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KK 277
AKN+M C+ G++L+ A I+RG+ KK
Sbjct: 293 LDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKK 323
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL V ++
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSC 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPRHG+Y+ V ++RG+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTK 336
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 410
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL V ++
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSC 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPRHG+Y+ V ++RG+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTK 336
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 410
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL V ++
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEALSVNDITNSC 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPRHG+Y+ V ++RG+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTK 336
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 410
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL V ++
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEALSVSDITNSC 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPRHG+Y+ V ++RG+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTK 336
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 408
+G + K+V+ +A I+ K + FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 410
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/103 (40%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L V E+
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 295
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPRHG+Y+ V +FRG+ + K + + +TK
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTK 338
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ +A I+ K S FV+W P K+ + PP + A
Sbjct: 316 CLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
+ NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/103 (40%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L V E+
Sbjct: 235 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 294
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPRHG+Y+ V +FRG+ + K + + +TK
Sbjct: 295 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTK 337
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ +A I+ K S FV+W P K+ + PP + A
Sbjct: 315 CLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAV 374
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
+ NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 375 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 411
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/103 (40%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L V E+
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 295
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPRHG+Y+ V +FRG+ + K + + +TK
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTK 338
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ +A I+ K S FV+W P K+ + PP + A
Sbjct: 316 CLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
+ NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/103 (40%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF F+P+ S + L V E+
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMC 295
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPRHG+Y+ V +FRG+ + K + + +TK
Sbjct: 296 FEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTK 338
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = +1
Query: 241 CDDIQGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMAS 396
C +G + K+V+ +A I+ K S FV+W P K+ + PP + A
Sbjct: 316 CLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAV 375
Query: 397 TFIGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
+ NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/103 (38%), Positives = 61/103 (59%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S ++ L V E+
Sbjct: 233 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLISSAHHEF--LSVDEITKSC 290
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F A N MV CDP+HG+Y+ V ++RG+ + K +++ + +T+
Sbjct: 291 FEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQ 333
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR---GLKMAST-----FIG 408
+G + K+V + +I+ + S FV+W P K+ + PP G MA +
Sbjct: 315 RGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLS 374
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI ++R+ +F M+ ++AF+HWY G G
Sbjct: 375 NTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEG 407
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL V ++
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSC 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPR+G+Y+ V ++RG+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTK 336
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 408
+G + K+V+ + I+ K S FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 410
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/103 (38%), Positives = 58/103 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF + PL S + AL V ++
Sbjct: 234 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEALSVNDITNSC 293
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F N MV CDPR+G+Y+ V ++RG+ + K + + +TK
Sbjct: 294 FEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTK 336
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 408
+G + K+V+ + I+ K S FV+W P K+ + PP + A +
Sbjct: 318 RGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLS 377
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 410
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 84.6 bits (200), Expect = 5e-17
Identities = 40/105 (38%), Positives = 59/105 (56%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L V E+
Sbjct: 236 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVSEITNVC 295
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTKTA 316
F + MV CDPR+G+Y+ ++RG+ + K++ S +TK A
Sbjct: 296 FEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRA 340
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 408
+G + KE++ ++ I+ K + FV+W P K+ + PP L+ A +
Sbjct: 320 RGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLS 379
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAIQ + R+ +F M+ ++AF+HWY G G
Sbjct: 380 NTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEG 412
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 81.0 bits (191), Expect = 6e-16
Identities = 37/103 (35%), Positives = 56/103 (54%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S +T LRF G LN DL + N+VP+PR+HF +AP+ S + + V E+ Q
Sbjct: 241 SSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAYHEQMTVAEITQQC 300
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F MV CDPR G+Y+ ++RG+ + K + + +TK
Sbjct: 301 FEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTK 343
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR--------GLKMASTFIG 408
+G + K+V+ +A+++ K S FV+W P K+ + PP L+ A +
Sbjct: 325 RGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLS 384
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 385 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 417
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 80.6 bits (190), Expect = 8e-16
Identities = 39/103 (37%), Positives = 55/103 (53%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF +APL S + V ++
Sbjct: 242 SSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHAC 301
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F MV CDPR G+Y+ V ++RG+ + K + S +TK
Sbjct: 302 FEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTK 344
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR-------GLKMAST-FIG 408
+G + K+++ +A ++ K + FVEW P K+ + PP G + S I
Sbjct: 326 RGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMIS 385
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 386 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 418
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/95 (37%), Positives = 53/95 (55%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF +AP+ S + L V ++
Sbjct: 239 SSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMC 298
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTS 286
F N MV CDP G+Y+ V ++RG+ + K + +
Sbjct: 299 FEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNA 333
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAV---CDIPPRGLKMAST-----FIG 408
+G + K+V+ +++++ K FV+W P K+ + I G +A +
Sbjct: 323 RGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLS 382
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HW+ G G
Sbjct: 383 NTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEG 415
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 80.6 bits (190), Expect = 8e-16
Identities = 39/103 (37%), Positives = 55/103 (53%)
Frame = +2
Query: 2 SGITTCLRFPGQLNADLRKLAVNMVPFPRLHFYTPGFAPLTSRGAQQYRALXVPELXLQM 181
S IT LRF G LN DL + N+VP+PR+HF +APL S + V ++
Sbjct: 214 SSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERASHEQNTVSDMTHAC 273
Query: 182 FXAKNMMVACDPRHGRYLTVATIFRGECL*KKLTSNWRIFRTK 310
F MV CDPR G+Y+ V ++RG+ + K + S +TK
Sbjct: 274 FEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTK 316
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Frame = +1
Query: 253 QGRMSMKEVDEQLANIQNKNSTYFVEWIPNNCKIAVCDIPPR-------GLKMAST-FIG 408
+G + K+++ +A ++ K + FVEW P K+ + PP G + S I
Sbjct: 298 RGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMIS 357
Query: 409 NTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
NTTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 358 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 390
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 403 IGNTTAIQTIFKRVSEQFVAMFRRKAFLHWYTGXG 507
+ +TTAI + R+ +F M+ ++AF+HWY G G
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 47
>U53342-2|AAA96214.1| 272|Caenorhabditis elegans Suppressor of
activated let-60ras protein 7, isoform a protein.
Length = 272
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 248 SSQRSNTSRVE--DHTRPSCFWRRTFAASARVXLKLDTVE 135
SS ++ SR+E DH SC W + F S + +K+ E
Sbjct: 118 SSVKAKNSRLEKVDHVHASCEWPQGFTVSLKAYIKVGQTE 157
>U53342-1|AAA96213.2| 371|Caenorhabditis elegans Suppressor of
activated let-60ras protein 7, isoform b protein.
Length = 371
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 248 SSQRSNTSRVE--DHTRPSCFWRRTFAASARVXLKLD 144
SS ++ SR+E DH SC W + F S + +K++
Sbjct: 259 SSVKAKNSRLEKVDHVHASCEWPQGFTVSLKAYIKVE 295
>AL024499-2|CAB54260.2| 242|Caenorhabditis elegans Hypothetical
protein H38K22.2b protein.
Length = 242
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 152 KLDTVELLATSAAQSQGCRNAGAETAPCSQPTSSDQRSAV 33
K + L A + A+S CRN ETA C QRS +
Sbjct: 104 KFHELYLFAFNYAKSAACRNLDLETAICCWDVLFGQRSTI 143
>AL024499-1|CAB54261.2| 295|Caenorhabditis elegans Hypothetical
protein H38K22.2a protein.
Length = 295
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 152 KLDTVELLATSAAQSQGCRNAGAETAPCSQPTSSDQRSAV 33
K + L A + A+S CRN ETA C QRS +
Sbjct: 157 KFHELYLFAFNYAKSAACRNLDLETAICCWDVLFGQRSTI 196
>U00066-4|AAM54165.2| 75|Caenorhabditis elegans Hypothetical
protein R12B2.7 protein.
Length = 75
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 38 LNADLRKLAVNMVPFPRLHFY 100
LN L L++N FP+LHFY
Sbjct: 41 LNDKLISLSINAFSFPKLHFY 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,734,729
Number of Sequences: 27780
Number of extensions: 285059
Number of successful extensions: 980
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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